LOCUS CBA31864.1 461 aa PRT BCT 22-MAR-2010 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata Short-chain specific acyl-CoA dehydrogenase, mitochondrial protein. ACCESSION FN543107-149 PROTEIN_ID CBA31864.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 564641) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA71069_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="Acads" /locus_tag="Csp_D29250" /EC_number="1.3.99.2" /db_xref="GOA:C9YEB9" /db_xref="InterPro:IPR006091" /db_xref="InterPro:IPR009075" /db_xref="InterPro:IPR009100" /db_xref="InterPro:IPR013786" /db_xref="InterPro:IPR036250" /db_xref="InterPro:IPR037069" /db_xref="UniProtKB/TrEMBL:C9YEB9" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:P15651" BEGIN 1 MLLTQDQEMI RDAVRDFAQA ELWPNAAKWG KEHTFPKAAH QGLAALGAYG ICVPEELGGA 61 GLDYVTLALV LEEIAAGDGG TSTVISVTNC PVNAILMKFG NAQQKKQWLE PLAQGQMLGA 121 FCLTEPHVGS DASSLRTTAL RQGDEYVING VKQFITSGKN GDVAIVIAVT DKAAGKKGMS 181 AFLVPTNAPG YVVARLEDKL GQHSSDTAQI NFDNCRIPAE NLIGKEGEGY GIALGGLEGG 241 RIGIAAQSVG MARSALDVAI AYAKDRQSFG QPIFNHQAVG FRLADCATQL EAARQLIWHA 301 AALRDAGRPC LKEAAMAKLF ASEMAEKXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 361 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 421 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPAFGHP V //