LOCUS CBA31676.1 358 aa PRT BCT 22-MAR-2010 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata sn-glycerol-3-phosphate import ATP-binding protein ugpC protein. ACCESSION FN543107-55 PROTEIN_ID CBA31676.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 564641) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA71069_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="ugpC" /locus_tag="Csp_D28310" /db_xref="GOA:C9YE25" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR008995" /db_xref="InterPro:IPR013611" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:C9YE25" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:Q98G42" BEGIN 1 MAASLQIAGI RKVFGKGDKA VEVLKKIEID VAPGEFLILV GPSGCGKSTL LNIIAGLEEP 61 SEGELRIAGK NVVGVAPAQR DIAMVFQSYA LYPTMSVADN IGFALEMRKV PVEERKKRIA 121 EVAAMLQIEH LLDRRPAQLS GGQRQRVAMG RALARDPQLF LFDEPLSNLD AKLRVEMRAE 181 IKRLHQVSGI TSVYVTHDQI EAMTLGSRIA VMKDGILQQI GTPDDIYNRP ANTYVATFIG 241 SPTMNLIKGH VEVPGAQGRF TFNGSTLELA TPATGDATLG VRPEHIELIS GDAAWCGEVA 301 VVEPTGADTY VVVKTSAGEV TVRTAPSASW KTGDQVGLRV NPANTNWFST ATGVRLDV //