LOCUS CBA30061.1 351 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata Uncharacterized ABC transporter ATP-binding protein ycjV protein. ACCESSION FN543104-1527 PROTEIN_ID CBA30061.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="ycjV" /locus_tag="Csp_A15270" /db_xref="GOA:C9YBM6" /db_xref="InterPro:IPR003439" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR008995" /db_xref="InterPro:IPR017871" /db_xref="InterPro:IPR027417" /db_xref="UniProtKB/TrEMBL:C9YBM6" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:Q8X8K4" BEGIN 1 MASIVLRGIT KIWGDVVVIP NLDLEVHEGE FLVLLGSSGC GKTTTMRMIA GLEDPTGGDI 61 LFNGKRVNAL APKDRNIAMV FQNYGLYPHL TVRDNIAYPL KVRNVPAGEH DSLVKKAAKR 121 VEIESYLDRK PKDLSGGQRQ RVALARAIVR QPDVFLMDEP LSNLDAKLRV TMRSELKHLH 181 HELGATVVYV THDQIEAMTL ATRVAIMSHG VIQQLDTPRN IYNDPANLFV AGFIGSPSMN 241 FVEGTVTSGS FISDAVKVDE IDIKHQGAAK LGFRWEDAEI VPVGKGNLQG QIYAVELIGE 301 STQVTLKVGQ DRVVVRAHKD YAANDGEVVD LKLHKPGCFY FNSKDGARLR S //