LOCUS CBA29988.1 982 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata Translation initiation factor IF-2 protein. ACCESSION FN543104-1490 PROTEIN_ID CBA29988.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="infB" /locus_tag="Csp_A14900" /db_xref="GOA:C9YBI9" /db_xref="InterPro:IPR000178" /db_xref="InterPro:IPR000795" /db_xref="InterPro:IPR005225" /db_xref="InterPro:IPR006847" /db_xref="InterPro:IPR009000" /db_xref="InterPro:IPR009061" /db_xref="InterPro:IPR013575" /db_xref="InterPro:IPR015760" /db_xref="InterPro:IPR023115" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR036925" /db_xref="UniProtKB/TrEMBL:C9YBI9" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:A1TSK3" BEGIN 1 MTSTTVAEFA NELKKSTDIL LEQLKSAGVP KASAADVLTD ADKHSLLNYL QNSHGTASPE 61 RKKITLVKKQ TTEIKQADAT GKARTIQVEV RKKRTFVRRD DGVEGTTEVE EQDVASAQAA 121 QALEDAELAR REEEASRQAE LIRRQEEELA QRRREREEQE ARAKAAAEQA AAAEREAEAA 181 ARLAKEQAVA QVQSAVKAEA APAAQAVDAA AAAQASEAAA KAAAQERAAA AAQASKAAAA 241 EEAARAADLG ERRRKAEAEA AAIRSMMAAP KKVMVAPKKV EEPKKVEEPK PAADAKAGMK 301 GTLHKPANGS AVAKPAKPAA GAPGAGAPAG NGKEVKSAKL SSSWAGDTAK KKELKTRGDT 361 TAGAGRSSNW RAGPKGRRGN DRDRDDHHNQ QSAPVEARVI EVHVPETITV AELAHKMAIK 421 ASEVIKQLMK LGQMVTINQP LDQDTAMIVV EELGHKAVVA ALDDPEAFTD DEVQGQEAPS 481 LPRAPVVTVM GHVDHGKTSL LDYIRRAKVA AGEAGGITQH IGAYHVETPR GMVSFLDTPG 541 HEAFTAMRAR GAQATDIVIL VVAADDGVMP QTKEAIKHAK AAGVPLVVAI TKSDKPDANP 601 DRVKQELVVE EVVPEEYGGD SPFVPVSSKT GMGIDALLEQ VLLQAEVLEL KAPVDAMAKG 661 LVIEAKLDKG RGPVATMLVQ SGTLKVGDVV LAGQTYGRVR AMLDENGHKI ETAGPSIPVE 721 IQGLTEVPQA GDEFMVLTDE RRAREIATYR AGKFRNTKLA KQQAAKLENM FSDIGAGDVK 781 MLPIIVKADV QGSQEALAQS LLKLSTDEVK VQMVYSAVGG ISESDINLAI ASKAIVIGFN 841 TRADAGARKL AEGNGVDIRY YNIIYDAVDE LKAAMSGMLA PEKREEVIGM AEIRTVFVAS 901 KIGTVAGCMV TNGFVTRNAH FRLLRDNVVI YTGELDSLKR MKDDVREVKE GFECGIKLKN 961 YNDIKEGDQL EFFEVKEIAR TL //