LOCUS CBA28812.1 631 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata 1-deoxy-D-xylulose-5-phosphate synthase protein. ACCESSION FN543104-901 PROTEIN_ID CBA28812.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="dxs" /locus_tag="Csp_A09010" /EC_number="2.2.1.7" /db_xref="GOA:C9Y9V0" /db_xref="InterPro:IPR005474" /db_xref="InterPro:IPR005475" /db_xref="InterPro:IPR005477" /db_xref="InterPro:IPR009014" /db_xref="InterPro:IPR020826" /db_xref="InterPro:IPR029061" /db_xref="InterPro:IPR033248" /db_xref="UniProtKB/TrEMBL:C9Y9V0" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:Q21UG7" BEGIN 1 MSSSNPSTTP LLATIDDPAA LRQLQRPQLR TLADELRNYL LHSVARTGGH LSSNLGTVEL 61 TVALHYVFNT PDDRIVWDVG HQTYPHKILT GRRDRMDSLR QFGGLSGFPR RDESEYDTFG 121 TAHSSTSISA ALGMALASRI KGEDRYSVAV IGDGAMTAGM AFEALNNAGV EDCRLLVILN 181 DNDMSISPPV GALNRYLAQL MSGQFYAAAK SVGKSVLKGA PPLFELAKRL EEQAKGMVVP 241 ATLFEKFGFN YIGPIDGHDL DSLIPTLENI KQLKGPQFLH VVTKKGQGYK LAEADPVAYH 301 GPGKFDPAVG LVKSTTPAKT TFTQVFGQWL CDMAAADERL VGITPAMREG SGMVEFEKRF 361 PQRYFDVGIA EQHAVTFAGG LATEGLKPVV AIYSTFLQRA YDQLIHDVAL QNLPVVFALD 421 RAGLVGADGA THAGAYDIPF LRCIPNMSVA CPADENECRQ LLSTAYAQNH PVAVRYPRGS 481 GAGVAVSSSL EGLPFGKGEI RKQGGNIAIL AFGTLLYPAL VAAEALGATV VNMRWAKPLD 541 TELLLQVAAT HSALVTVEEG ATMGGAGSAV LEALQAAKLS IPVLQLGLAD EFIEHGDPAY 601 LLQMQGLDAA GIQASVRQRF GHLLTHLVRV V //