LOCUS CBA28686.1 490 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata 3-isopropylmalate dehydratase large subunit protein. ACCESSION FN543104-839 PROTEIN_ID CBA28686.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="leuC" /locus_tag="Csp_A08390" /EC_number="4.2.1.33" /db_xref="GOA:C9Y9N8" /db_xref="InterPro:IPR001030" /db_xref="InterPro:IPR004430" /db_xref="InterPro:IPR015931" /db_xref="InterPro:IPR018136" /db_xref="InterPro:IPR033941" /db_xref="InterPro:IPR036008" /db_xref="UniProtKB/TrEMBL:C9Y9N8" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:A1WAS7" BEGIN 1 MVSLKEAKMA RTLYDKLWDD HVVHTEDDGT SILYIDRHLV HEVTSPQAFE GLREAGRKVW 61 RISSIVATAD HNTPTTGWEL GYDGITDPTS KEQVTTLDSN IKEFGSAAYF PFLSKRQGIV 121 HVMGPENGAT LPGMTVVCGD SHTSTHGAFG ALAHGIGTSE VEHVMATQTL LAKKAKNMLI 181 KVEGSVAPGI TGKDIVLAII GKIGTAGGTG YTIEFGGSAI RALSMEGRMT VCNMAIEAGA 241 RAGLVAVDEK TIDYVKGRPL APGANAASPE AAAVEWDQAV AFWKTLHSDA GAHFDTVVEL 301 DATQIVPQVT WGTSPEMVLG VDAIVPDPDK EKDASKRGAI ERALTYMGLE PGKALNDLFV 361 DKVFIGSCTN SRIEDMREAA AVVKKLGQKV AKNIKLAMVV PGSGLVKEQA EREGLHEIFK 421 AAGFEWREPG CSMCLAMNAD RLEPGERCAS TSNRNFEGRQ GAGGRTHLVS PAMAAAAAIH 481 GHFVDIRKFA //