LOCUS CBA28210.1 1771 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata hypothetical protein protein. ACCESSION FN543104-614 PROTEIN_ID CBA28210.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /locus_tag="Csp_A06140" /db_xref="GOA:C9Y913" /db_xref="InterPro:IPR001343" /db_xref="InterPro:IPR010566" /db_xref="InterPro:IPR011049" /db_xref="InterPro:IPR018247" /db_xref="InterPro:IPR018511" /db_xref="UniProtKB/TrEMBL:C9Y913" BEGIN 1 MEAPVSKDYY DAIARRESGL RAPLDSPDRY STENQFGYLG KYQLGTAALK EAGFYLGKVD 61 KQYQNWSDDS WSFKAEVFGV TNKEEFLRSA PAQEAAVRSY TDKNWTYIQK YGLDKFIGSE 121 VEGVQITAEG LLAGTHLVGI GATIDFVKNK NEKKDANGTS VKSYMKMFPP PSPYLAEEQK 181 LRRQNSEIDS ALIASLSFSQ QQESGTNTSN QAQSEISRLA RAQQAAADAA AQSAREAFRA 241 SETTYTNSSS PNYSQWSSSD YSGNSKSEMG REISSLTNRY GSSSTGDPIV IDLDGNGIEL 301 YSRNNSPAQF DFDDDGYAET TAWAGPQDGI LVIDEGNDNQ ITQSKEIAFA KWTAAEGDTD 361 LKGLAATFDS NHDGVLDARD QRFADFKVWK DANSNGVVDA GEMQTLAQAG IKSFNLKVKD 421 GTNLSLDDGS VIHGLFDIQR ADGKVIQGAD VSLAYNDLGY RTRTDANGNT VVEFESGSAL 481 HYRNIGASEG NANFNLGTDT DTTLWVGASG NAGANILSAS SKTTEVLLDG GAGDDILLGG 541 SGDDILLDGE GADQLQGGAG NDQLFVDGAD LAALSALTGS AKATRINGGD GYDSLVVLDN 601 SQLNLVADDI NVESVLAGSA NDSITGKNNA VNYVFDGGTG NDNLTTAGGE DVLLGGAGND 661 TLKSGAGADV LSGGEGTDRL EGGAGDDVYV LNRGDGADRI LDYAEDWYKQ KYSYQEQVSY 721 SEQYNYYESV YHTDGKSGSY VNELRSGYRA ATRMEDRNGY RDVFGEIDGG IDTLQFGLGI 781 SVQDLVLSRV GEDMVVSLRA SDNENALSAD SVTVEGWADT KNRIENFAFT DGNLLDFSQI 841 VNAQSGMGAN DTLSGTAEGD FMSGGGGNDT LSGAAGKDIL VGGTGDDSLD GGADKDFLFA 901 GAGNDTLIGG DGNDYLIAEA GDDVLEGGDG DDVLVGMDGN DTLRGGAGKD MLLGGVGVDI 961 LQGGGGDDTY FYFRGDGKDQ IFDNLEHQET YQEQVYTGQV YEDYGKGGNW VNQYRTETRV 1021 RTVQDDGGKD SLQFGQGIVL DDLFFAMSGS DLVVGLREEA NTLLADMDDQ VTIKQWNNVK 1081 NRIETFGFAD GLSLNMGNID QVASGYGADD TLTGHAGGDL LSGGAGNDAL NGLGGNDYLI 1141 GGAGNDQLNG GDGNDDLFGG AGDDTLEGGE GVDYLIGGSG ADTINGGNGN DVITGGAGND 1201 ILNGGRGNDV YHFNRGDGQD TINEAALGTE TIQESYTYTE QVLQTQSDGK SSYQVWVNET 1261 RTGYRSVLRA VEGGEDTLQF GRNIDISDIM LERNGSDMVI SLLPLTGTEV TDSITIKGWD 1321 TPEYRIENLR FINDFAVDIG DIADARKGTT GNDVLTADTN VATWLGGGAG NDTLTGSSAA 1381 DILHGAAGAD TLNGGTGDDV YIFGRGDGKD ILNDSGSAGV GTDKSRPGGD KLLFGTNITM 1441 EDLVLQRFGE DMVVYLRDRN NPEGALSALT DSVTITNWSN TNNRVEVFQF FDGKDFDVSG 1501 ITNTYLGQGG ADIADTLTGS AGADWMDGFA GNDTLRAGAG KDFVQGGSGN DTIYGEADDD 1561 LLSGGLGNDT VYGGTGNDIV VGDAGNDSLF GDEGNDVLAG GKGDDILNGG AGDDFIMGDA 1621 GNDTYQASTG FDTYRFGFGD GNDTYIGSEQ ADINGTDVIQ LESGVTKESL WFERVGNDLT 1681 MRLLGATDTM TFKDWYYSDD AIKRAQTDTA QRYVYGFEVN GELLTYNKVQ TLVNAMNGFT 1741 PNDGQSVYGV NAVELPGSVR SAVNSAWVSV A //