LOCUS CBA27542.1 464 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata Diaminopimelate decarboxylase protein. ACCESSION FN543104-280 PROTEIN_ID CBA27542.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="lysA" /locus_tag="Csp_A02800" /EC_number="4.1.1.20" /db_xref="GOA:C9Y829" /db_xref="InterPro:IPR000183" /db_xref="InterPro:IPR002986" /db_xref="InterPro:IPR009006" /db_xref="InterPro:IPR022643" /db_xref="InterPro:IPR022644" /db_xref="InterPro:IPR029066" /db_xref="UniProtKB/TrEMBL:C9Y829" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:Q9KVL7" BEGIN 1 MRPNRPAIST QSSTQSVAGQ QHNALSRHQS FRHHTCTMSA TLLPGQPHVH YENSQLHVEG 61 CSLDALASTH GTPLFVYSKA SMLDALAAYQ RGFAGRNARI CYAMKANSSL AILQLFAKAG 121 CGFDIVSEGE LARVLAAGAD AGKVIFSGVG KTRAEMARAL EVGIGCFNVE SEAEIDVLNE 181 VALGMGKQAP ISIRVNPNVD PKTHPYISTG LKGNKFGIAH ERTLLTYQRA AALPGLKVVG 241 IDCHIGSQIT EETPYLDAMD RMLDLVESIE AAGIGIHHID FGGGLGINYN GDTPPAADAL 301 WHKLLAKLDA RGFGQRQLMI EPGRSLVGNA GVCVTEVLYM KPGEQKNFCI VDAAMNDLPR 361 PAMYQAFHTI VPVKQAASQS SGAEVFDVVG PVCESGDWIG HDRTLQVQSG DKLAVLSAGA 421 YCMSMSSNYN SRPKAAEVLV DGAHSHLIRQ RDSFADQIRG EKLL //