LOCUS CBA27502.1 425 aa PRT BCT 16-AUG-2011 DEFINITION Curvibacter putative symbiont of Hydra magnipapillata 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN protein. ACCESSION FN543104-260 PROTEIN_ID CBA27502.1 SOURCE Curvibacter putative symbiont of Hydra magnipapillata ORGANISM Curvibacter putative symbiont of Hydra magnipapillata Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter. REFERENCE 1 (bases 1 to 1568541) AUTHORS Rattei T. JOURNAL Submitted (16-AUG-2009) to the INSDC. Rattei T., Genome Oriented Bioinformatics, Technische Universitaet Muenchen, Am Forum 1, Bavaria, 85354 Freising, GERMANY. REFERENCE 2 AUTHORS Chapman J.A., Kirkness E.F., Simakov O., Hampson S.E., Mitros T., Weinmaier T., Rattei T., Balasubramanian P.G., Borman J., Busam D., Disbennett K., Pfannkoch C., Sumin N., Sutton G., Viswanathan L., Walenz B., Goodstein D.M., Hellsten U., Kawashima T., Prochnik S.E., Putnam N.H., Shu S., Blumberg B., Dana C.E., Gee L., Kibler D.F., Law L., Lindgens D., Martinez D.E., Peng J., Wigge P.A., Bertulat B., Guder C., Nakamura Y., Ozbek S., Watanabe H., Khalturin K., Hemmrich G., Franke A., Augustin R., Fraune S., Hayakawa E., Hayakawa S., Hirose M., Hwang J., Ikeo K., Nishimiya-Fujisawa C., Ogura A., Takahashi T., Steinmetz P.R., Zhang X., Aufschnaiter R., Eder M.K., Gorny A.K., Salvenmoser W., Heimberg A.M., Wheeler B.M., Peterson K.J., Boettger A., Tischler P., Wolf A., Gojobori T., Remington K.A., Strausberg R.L., Venter J., Technau U., Hobmayer B., Bosch T.C., Holstein T.W., Fujisawa T., Bode H.R., David C.N., Rokhsar D.S., Steele R.E. TITLE The dynamic genome of Hydra JOURNAL Nature 464(7288), 592-596(2010). PUBMED 20228792 COMMENT The assembly of the Hydra magnipapillata yielded eight large putatively bacterial scaffolds as evidenced by: (1) high G+C content (in contrast to the low G+C content of the Hydra genome) (2) no high-copy repeat sequences typical of Hydra scaffolds (3) closely spaced single-exon ORFs with best hits to bacterial genes. These scaffolds spanned a total of 4 Mbp and represent an estimated 98% of the bacterial chromosome. Phylogenetic analysis of 16S rRNA and conserved clusters of orthologous groups of proteins (COGs) indicate that this bacterium is a novel Curvibacter species belonging to the family Comamonadaceae (order Burkholderiales). FEATURES Qualifiers source /organism="Curvibacter putative symbiont of Hydra magnipapillata" /mol_type="genomic DNA" /clone="HmaUn_WGA69518_1" /db_xref="taxon:667019" protein /transl_table=11 /gene="yiaN" /locus_tag="Csp_A02600" /db_xref="GOA:C9Y809" /db_xref="InterPro:IPR004681" /db_xref="InterPro:IPR010656" /db_xref="UniProtKB/TrEMBL:C9Y809" /inference="similar to AA sequence:UniProtKB/Swiss-Prot:P37675" BEGIN 1 MTIIIFLGSL LAAMAVGVPI AFSLLLCGAA LMWHLNMFDA QILAQNLLEG ANSFPLLAVP 61 FFMLAGEIMN AGGLSRRIVN FAMALVGHVK GGLGYVTIVA AVIMASLSGS AVADAAALTA 121 LLLPMMVAAG HDRARSAGLI ASAGIIAPII PPSIGFVIFG VAANVSISKL FMAGIFPGLM 181 LALSLVGTWW WLARKEHITP PPRKNLAEVL EAMRLATWAL VLPFIIVFGL KFGVFTPTEA 241 AVVAAVYSLF VSTVIYRELN FKKLVPLFIT AAKTSAVVMF LVAAAMVSAW LITVANLPAQ 301 VVALLEPLLD SPKLLMFAIM VLVIVVGTAL DMTPTILLLT PVLIPVVKAA GIDPVYFGVL 361 FIINNAIGLI TPPVGTVLNA VAGVGKVSMD EVTKGVVPFM IAQFAIMFLM VLFPQLVMVP 421 ARWFY //