LOCUS       CAR97832.1               826 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans SSD domain-containing protein protein.
ACCESSION   BX284606-3193
PROTEIN_ID  CAR97832.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="ptr-24"
                     /locus_tag="CELE_F46G10.5"
                     /standard_name="F46G10.5a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00004238"
                     /db_xref="EnsemblGenomes-Tr:F46G10.5a"
                     /db_xref="GOA:B6VQ55"
                     /db_xref="InterPro:IPR000731"
                     /db_xref="InterPro:IPR003392"
                     /db_xref="UniProtKB/TrEMBL:B6VQ55"
                     /db_xref="WormBase:WBGene00004238"
     intron_pos      75:0 (1/15)
     intron_pos      145:0 (2/15)
     intron_pos      238:0 (3/15)
     intron_pos      280:2 (4/15)
     intron_pos      325:1 (5/15)
     intron_pos      354:0 (6/15)
     intron_pos      402:0 (7/15)
     intron_pos      441:1 (8/15)
     intron_pos      476:0 (9/15)
     intron_pos      567:1 (10/15)
     intron_pos      596:2 (11/15)
     intron_pos      660:2 (12/15)
     intron_pos      696:1 (13/15)
     intron_pos      737:0 (14/15)
     intron_pos      764:0 (15/15)
BEGIN
        1 MILGPSLGHL GSIVGSRPWL WITLSLFIGI ASFTTLIIKP PKKEFGFDTG YTTSDAPSIR
       61 EMKAQRDFFT GGKKGTPWYQ ALFFEPRNNE KSMHKGREYD EMKQFYRTVK NMIIRYDETL
      121 EKNITYYDLC GSTCDLNELL FTTVTMSFWS GLTYPIASIF GYESNIGKHF YEIETSETGE
      181 FLSAKKAMLV YMAFYETKHV KADLKLYEEL MQNAVDVHNA NKDNSVIVTL HGERGMSIAV
      241 EAGMKHAFNY LGFGVLLSLF VLFGVLFFFS RLFCQFTIFR IVFLWIVAII APILSFITSF
      301 AIYNFFGYSI TPLIIFTPFL ALIHGYYTVI MLTHTWLSDS ELRRDSRDEH LLEVFATCMP
      361 SLIVTASPAI ALLLCSVYPI ENYGAVSILL GLIMTFDIVF AIFFFSPFML IICPTQDFSP
      421 LPTNSKKIVK TTLKSVENMR DYYCNYVDKS LLVEIVAVAG IIALLIIPVY KGCTSVEGNL
      481 DYRQLLKQDS NRNHGVHLMS DVVWPTWFSI MFFVNKPPNF SNVREYGRFK SMMAEIDAIE
      541 NKLPNNTDMV WINDFCRFTN SKPTDDALNM TRFKSFIEDA IYKSWKDGVK FIFLNDTHPV
      601 ITSMLHIVSF EKTTSLADKA KLFEKCRAVT NKYPEFKTTP FDTEIGFADI ILQVPLVVAV
      661 IPLVGTVAMF IVSTIIIGNL SVAVLNFIAV CILYASTIGT VSLYDVTINP FNAAFFLIIA
      721 ALAPSCTTHY CYYYQQAMRI KLRAKKVDRM NEMLRKCFFP CIASVICSIA VFVPTMFCHI
      781 NIFESVAFTN NVFCLLGIVI AFFVQVMLNM LPDMFTGTHW FCSPQS
//