LOCUS       CAR97805.1              1092 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Protein fantom protein.
ACCESSION   BX284602-3820
PROTEIN_ID  CAR97805.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="mks-5"
                     /locus_tag="CELE_C09G5.8"
                     /standard_name="C09G5.8b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00007490"
                     /db_xref="EnsemblGenomes-Tr:C09G5.8a"
                     /db_xref="WormBase:WBGene00007490"
     intron_pos      80:2 (1/12)
     intron_pos      167:2 (2/12)
     intron_pos      266:0 (3/12)
     intron_pos      323:0 (4/12)
     intron_pos      396:0 (5/12)
     intron_pos      469:0 (6/12)
     intron_pos      559:0 (7/12)
     intron_pos      709:0 (8/12)
     intron_pos      743:2 (9/12)
     intron_pos      900:1 (10/12)
     intron_pos      1009:1 (11/12)
     intron_pos      1066:1 (12/12)
BEGIN
        1 MSDDESGRST PVIEEKKKPR RKSRKSSHQE PSKNPIPPPR IPDQTEKVLL DKLKVAENDL
       61 AMLQEECDLV KKANERLVHQ SLSKSTEYGA RESIEEKKKI VELEELLKET EKRIKESEHR
      121 RREDQKKFEA MRLHYKNKYD AAKKTEKKLS VVAKNSKVEE ERIEEEKISH SPPPMTFEPI
      181 RKRHSQSEIS RMRRADDDLL QKLYKEVADI LHSHDVGIAE INTLGASENS LARWQKLYSE
      241 LYEELEKVRN MLLIQYDINQ KQMKEIKLLK DELDRLKTVS AEILSKSREE VEERQKKIFM
      301 LEEQIRTIAY SGQQPVKLLA NQINIPTPRV NTDLSVKLIN VKPSPSLTSK FFFSLEFFDF
      361 QLETTPIMDA KQHNMDFTTV YDVLVSNLLI HYLQTNGIVI EMYRPASDCY KLLAAATISL
      421 IPLFEDSVLR KFCSEIMLKS VDTGVEMCTL RYEIEVSQPI SDSFKKFKKS EMARNMLPLQ
      481 LENEDTEDTN FDPLTIMVNR VVGLDTFGKD PSTEFCIVDE FLSFSPYFTD FSTSSEIRSK
      541 RDCYIPKIDI ARNLFATSSI SFFLIENIPR QDGVIATLHL PLHPLCKLGG SIKGTFPMLD
      601 TDGRPSSVSL DLCLIWKHEI PSFFLKHEPK EPLKEVKDTP ILPQPVRRTS KEFVVTPVKE
      661 AELHDAEPTS MPPKAPEPTT APLRRLSTDS SDTSFSHSSK DLFSPPTNPQ TYDYEIPAVT
      721 PALVDSDGEE EADRIVFDDD DDEIESVSAV SSQRDPEPLE VPERQVENLP SPEDTPRPSD
      781 PLKPNGTNES KESTPVTQRS VDKTDDVAPV DPELEPESGP EPEPVVESEP NEVAETEEDR
      841 KRELKTEELK SLLGALPPIA KPRNIPVGPI ALTEQPEATR QQGSTGRILF TDPLHFSVPP
      901 SESSSTSSPR RAEKAPVPLP DYEGHSLIKV RKPLSPTDKD VLEPNMKVSI QLETFELVPG
      961 SSLTPLTREE TTFFVDWVFL DFTNEQSKST IFDFPRRPQE MVDIRYTKEY TLTRGQLSLL
     1021 DQWIRASIKF ELTIIKISPG DEEELGFGSL ILVPNNTQNK SFVIDVYDRS GIVQAEMTLT
     1081 LHFSRALIEQ LT
//