LOCUS       CAR64682.1               732 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Receptor-type tyrosine-protein
            phosphatase kappa protein.
ACCESSION   BX284602-3042
PROTEIN_ID  CAR64682.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="T13H5.1"
                     /locus_tag="CELE_T13H5.1"
                     /standard_name="T13H5.1d"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00011755"
                     /db_xref="EnsemblGenomes-Tr:T13H5.1d"
                     /db_xref="GOA:G5EGJ3"
                     /db_xref="InterPro:IPR000242"
                     /db_xref="InterPro:IPR000387"
                     /db_xref="InterPro:IPR003595"
                     /db_xref="InterPro:IPR016130"
                     /db_xref="InterPro:IPR029021"
                     /db_xref="UniProtKB/TrEMBL:G5EGJ3"
                     /db_xref="WormBase:WBGene00011755"
     intron_pos      61:1 (1/16)
     intron_pos      100:0 (2/16)
     intron_pos      126:0 (3/16)
     intron_pos      156:0 (4/16)
     intron_pos      202:0 (5/16)
     intron_pos      295:2 (6/16)
     intron_pos      353:0 (7/16)
     intron_pos      392:0 (8/16)
     intron_pos      425:1 (9/16)
     intron_pos      450:0 (10/16)
     intron_pos      496:0 (11/16)
     intron_pos      536:0 (12/16)
     intron_pos      564:0 (13/16)
     intron_pos      608:2 (14/16)
     intron_pos      654:0 (15/16)
     intron_pos      707:0 (16/16)
BEGIN
        1 MDALRGSPSP GSSQYIHPER ASQSTGNLNP PQSKKGKRRR KVQKTWQAMS PGNFSKQLQL
       61 VQEEKAMQAV PTSPVDASKF VAYVQERRKK RILFKGEYLM VNRSIDNNKC RCDVGSTMMD
      121 RNPYPDTLPY DYNRVILPRI DGDENSHYIN ASYVNSWLRD KAYVVTQAVR TKPMNAEFWR
      181 MVWELGSNCI VMLTKVFDFM RVMCLQYWPL TKFQFREIEV ETTEVKTYSH FVIRTFKLTR
      241 TTPESIETRI VKHFHFTEWE LDSFPYISAF IELRRRVRQF MEKNPVEAPM VVHCSNGAGR
      301 SGAFLALDAN LELMKKTGQL DFFEYAKTLV NSRPHLIDSV EQYMFIYEVL SEAVMCNVQP
      361 IEMHLLKERS SMYKAKKNRE LLETQETHEN KLLMHLTPTL RIGDCAGGHR LENRGKNRDV
      421 MVVPPDHARP YLQTLHGESK DYTYINAVEV DGFTRKAEFI VTEWPKQSTV DSFWTLIYDH
      481 ACHTVVNLSN QGSQRHYPSF IHNKGKANYG PFIVEIMNYH QYPAMTSHMV KVMKRTFMIS
      541 DIMATGAQNQ QIDAEVRICC VIQVRMWPIE NKVPLSTTGL IDVIKMARSW RKRAPDRPET
      601 KPTIVMSHNG VSRVGVYIGA NICIDQMDID HEVDVFHAVK MMRINRPQLI DMKDEYKYLY
      661 DVMLHWYMTN PDYRIYDKED SEDTDSQKTS RPPSNRHSIK EKSSFRSKFS FRRRNTTRQN
      721 ENNAVDQRVN SN
//