LOCUS CAN75028.1 2182 aa PRT PLN 05-FEB-2008
DEFINITION Vitis vinifera hypothetical protein protein.
ACCESSION AM471987-1
PROTEIN_ID CAN75028.1
SOURCE Vitis vinifera (wine grape)
ORGANISM Vitis vinifera
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis.
REFERENCE 1
AUTHORS Velasco R.
JOURNAL Submitted (19-DEC-2006) to the INSDC. Velasco R., Genetics and
Molecular Biology, istituto agrario "San Michele all'Adige", Via
Edmondo Mach, 1. San Michele all'Adige (Tn), 38010, ITALY.
REMARK revised by [3]
REFERENCE 2
AUTHORS Velasco R., Zharkikh A., Troggio M., Cartwright D.A., Cestaro A.,
Pruss D., Pindo M., FitzGerald L.M., Vezzulli S., Reid J.,
Malacarne G., Iliev D., Coppola G., Wardell B., Micheletti D.,
Macalma T., Facci M., Mitchell J.T., Perazzolli M., Eldredge G.,
Gatto P., Oyzerski R., Moretto M., Gutin N., Stefanini M., Chen Y.,
Segala C., Davenport C., Dematte L., Mraz A., Battilana J.,
Stormo K., Costa F., Tao Q., Si-Ammour A., Harkins T., Lackey A.,
Perbost C., Taillon B., Stella A., Solovyev V., Fawcett J.A.,
Sterck L., Vandepoele K., Grando S.M., Toppo S., Moser C.,
Lanchbury J., Bogden R., Skolnick M., Sgaramella V.,
Bhatnagar S.K., Fontana P., Gutin A., Van de Peer Y., Salamini F.,
Viola R.
TITLE The first genome sequence of an elite grapevine cultivar (Pinot
noir Vitis vinifera L.): coping with a highly heterozygous genome
JOURNAL PLoS One 2(12), e1326-e1326(2007).
REFERENCE 3 (bases 1 to 21259)
AUTHORS Velasco R.
JOURNAL Submitted (04-MAY-2007) to the INSDC. IASMA, Genetics and Molecular
Biology Department, Via Edmondo Mach, 1 38010 S. Michele all'Adige
(TN) - ITALY
COMMENT NOTE: This is a 'working draft' sequence. The true order of the
contigs
and the gap size among them are not known. The actual genome
coverage is
11X, 7X sequenced by Sanger method and 4X by pyrosequencing.
Sequencing
effort has been performed by IASMA, Myriad Genetics and 454 Life
Science.
The gene prediction has been performed by FGENESH program in
collaboration
with Softberry, while the identified genes has been annotated by
similarity search and their function has been described using Gene
Ontology terms (www.geneontology.org).
FEATURES Qualifiers
source /organism="Vitis vinifera"
/chromosome="17"
/cultivar="Pinot Noir"
/mol_type="genomic DNA"
/clone="ENTAV 115"
/db_xref="taxon:29760"
protein /locus_tag="VITISV_026823"
/note="GO:0004527 GO:0004519 GO:0003723 GO:0003676
GO:0016740 GO:0003964 GO:0006278"
/db_xref="GOA:A5BUT3"
/db_xref="InterPro:IPR000477"
/db_xref="InterPro:IPR026960"
/db_xref="InterPro:IPR036691"
/db_xref="UniProtKB/TrEMBL:A5BUT3"
/experiment="confirmed by EST"
intron_pos 232:1 (1/6)
intron_pos 502:0 (2/6)
intron_pos 625:0 (3/6)
intron_pos 662:0 (4/6)
intron_pos 1843:0 (5/6)
intron_pos 1982:0 (6/6)
BEGIN
1 MGWGISHKKM KCKVERIIVE KKYFQVEFEG LNGGTWVSVT ERSRGFVVSI GFDMEEMDWL
61 MEHLKKAVEV EASRGFVRKI RGKTKTLLME ICFNNRGRFM KITEFVTKRK PLVLIVPEGV
121 KGKGWEDLKK AILSVQEYYE RDGGASKEKN GDIRMNRDTF RGGRSYAEVV AEAGLRTGGP
181 LLAGKWARAV ICESQEEVQD WTPRRKSHCE DDGDERNGVH KSHFSFQRML LFQLNFILKK
241 WGRVTKVAKE TLKLVDLTRA KLWVEMLPNI VLPALLEVED GEWSYTVAVS VTGEDEDADA
301 VMSEVNRSRN EWVRVGGCVS QWSKVAEGLQ GSVRDFECYR KRRLPRARYR QSRTCLEDKG
361 ETGGGXSRSG QAEAIFIGPE HESSFKAQKV RAQSGMRHRG LQDGPDDPQA HQSASASPLS
421 PQRAASSTKA VATLCPDXAR AGAEVFFXEE GRAVELKAQS LPNSRPLSDN IVGCKFKXPS
481 GLGQKLGGTK PSGMEAWSRR EXWSTLFPPS ADRRXGHRCC SEPIFTRGSS XSSEDRNMEE
541 XFGMGFQMER GIRVNPLSRC PLSXKLSKED TSASRVEVKG GLTGRVGFDP RGYSXMGSPS
601 NSIIRGKGLI FEGFCEIPGA XNLEXSESCT PKDSIVRSHK EVSGEFLIDG LSPGKMAKVR
661 EETKKEICDR RFVGSVWTVR NKEWVVLXAS GASGGILIIW DSKILSREEV VIGSFSVSVK
721 FSLDGCGPLW ISAVYGPNSP SLRKDFWVEL FDIYGLTYPL WCVGGDFNVI RRSSEKMGGS
781 SLTPSMRDFD SFISECELLD PPLRNASFTW SNMQESPVCK RLDRFLYSNX WGLLFPQGLQ
841 EALIRRTSDH WPIVMDTNPF MWGPTPFRFE NMWLQHTNFK ENFRDWWSGF QGNGWEGHKF
901 MRRLQYVKAK LKEWNKFSFG ELKEKKKSIL NDLAXFDAIE QEGGLNPDLI XQRASRKGEL
961 EVLILREEIH WRQKAKVKWV KEGDCNSXFY HKVXNGRXNR KYIKELENER GLVLKNXESI
1021 TEEILHYFEK XYTNPTGESX GVEGLDWSPI SEESALRLES XFTXEEISKA IFQLDRDKAX
1081 GPBGFTIAVF QECWDVIKED LVRVFVEFHS SGIINQSTNA SFIVLXPKKS LSKRISDFRP
1141 ISLITSLYKI IAKVLSGRLR GVLHXTIHYT QGAFVQGRQI LDAVLIANEI VDERRRSGEX
1201 GVXFKIDFEK AYDHVKXDFL DHVLEKKGFS PRWRKWMSGC LSSVSFAILV NGSAKGWVKA
1261 SRGLRQGDPL SPFLFTLVAD VLSRMLMRAE ERNLMEGFRV GRNRTRVSHL QFVDDTIFFS
1321 NSREEELQTL KSLLLVFGHI SGLKVNLNKS SIYGINLDQA HLSRLAEMLD CKASGWPILY
1381 LGLPLGGNPK ACGFWDPVVE RISSRLDGWQ KAYLSXGGRI TLIQSCLSHL PSYFLSLFKM
1441 PASVAAKIER LQRDFLWSGV GEGKRDHLVR WDIVCKPKTI GGLGLGNISW RNLALLGKWL
1501 WRYPREGSAL WHQVILSIYG SHSNGWDANT LVRWSHRCPW KAIAQVFQEF SLITRYVVGN
1561 GDRIRFWEDL WRGDQPLGIQ YPRLFRVVVD KNISISSVLG PSRPFLWNLN FRRNLSDSEI
1621 EDLEGLMRSL DDLYLSPSIP DARLWPLSSS GLFSVKSFFL ALSQSSGSSQ NFPSKFVWNS
1681 QVPFKVKSFV WLVAHKKVNT NDMLQVRRPY KALSPNICIL CMKHGESTDH LFLHCSLMIG
1741 LWYRLFQLAK MDWVPPRSIY DMMSIKFKGF GNSKRGIVLW QAASIALIRV VWWERNAKIF
1801 EDKARNSEVL WDSIVFLASL WAFCSKAFKG IPLNVIHLDW IAGEARLFTK EPAKTDAAYA
1861 TWDAENSMIM AWLVNAMEED ISANYMCYST AKELWDNINQ MYSDFGNQSQ VYELEMKLGE
1921 IRQEDNIVTR YFNTLKGLWQ DLDLFNEYEW KCSEDGNHYR KMVECTRNFK FLAGLNIEFD
1981 EKTVTAPIEN SALAMPIAVV AISRNPNTQR QTEEKTRVWC DFCNKPRHTR ETCWKIHGKP
2041 MNWKPMERKN NKLGNQSNRN IVVAITAEMA SLSREQMEQF LQLLKSNPPA TTPIGLLAQI
2101 NSVFSITTCS SAPWILDSSA SDHITSISNW FQTYVLCPGN KKVQIADGSL SPIVGKDSIS
2161 ISENIVLQSV LHVPKLTVKK ND
//