LOCUS CAM33507.2 938 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans G-protein coupled receptors family
3 profile domain-containing protein protein.
ACCESSION BX284606-2352
PROTEIN_ID CAM33507.2
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="mgl-1"
/locus_tag="CELE_ZC506.4"
/standard_name="ZC506.4b"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00003232"
/db_xref="GOA:A3FPK2"
/db_xref="InterPro:IPR000162"
/db_xref="InterPro:IPR000337"
/db_xref="InterPro:IPR001828"
/db_xref="InterPro:IPR011500"
/db_xref="InterPro:IPR017978"
/db_xref="InterPro:IPR017979"
/db_xref="InterPro:IPR028082"
/db_xref="InterPro:IPR038550"
/db_xref="UniProtKB/TrEMBL:A3FPK2"
/db_xref="WormBase:WBGene00003232"
intron_pos 21:0 (1/18)
intron_pos 33:0 (2/18)
intron_pos 68:2 (3/18)
intron_pos 96:0 (4/18)
intron_pos 132:2 (5/18)
intron_pos 195:2 (6/18)
intron_pos 232:1 (7/18)
intron_pos 270:2 (8/18)
intron_pos 394:2 (9/18)
intron_pos 427:0 (10/18)
intron_pos 476:1 (11/18)
intron_pos 531:0 (12/18)
intron_pos 565:0 (13/18)
intron_pos 644:2 (14/18)
intron_pos 731:0 (15/18)
intron_pos 755:1 (16/18)
intron_pos 838:0 (17/18)
intron_pos 886:2 (18/18)
BEGIN
1 MFSVLALAIQ ILANVNVVAQ TTEAVDLAPP PKVRQIRIPG DILIGGVFPV HSKSLNGDEP
61 CGEIAETRGV HRVEAMLYAL DQINSQNDFL RGYKLGALIL DSCSNPAYAL NQSLDFVRDM
121 IGSSEASDYV CLDGSDPNLK KQSQKKNVAA VVGGSYSSVS VQLANLLRLF RIAQVSPAST
181 NADLSDKNRF EYFARTVPSD DYQAMAMVEI AVKFKWSYVS LVYSADEYGE LGADAFKKEA
241 RKKGICIALE ERIQNKKESF TESINNLVQK LQPEKNVGAT VVVLFVGTEY IPDILRYTAE
301 RMKLTSGAKK RIIWLASESW DRNNDKYTAG DNRLAAQGAI VLMLASQKVP SFEEYFMSLH
361 PGTEAFERNK WLRELWQVKY KCEFDTPPGS TASRCEDIKQ STEGFNADDK VQFVIDAVYA
421 IAHGLQSMKQ AICPDDAIEN HWISRYSKQP EICHAMQNID GSDFYQNYLL KVNFTDIVGK
481 RFRFSPQGDG PASYTILTYK PKSMDKKRRM TDDESSPSDY VEIGHWSENN LTIYEKNLWW
541 DPDHTPVSVC SLPCKIGFRK QLIKDEQCCW ACSKCEDYEY LINETHCVGC EQGWWPTKDR
601 KGCFDLSLSQ LKYMRWRSMY SLVPTILAVF GIIATLFVIV VYVIYNETPV VKASGRELSY
661 ILLISMIMCY CMTFVLLSKP SAIVCAIKRT GIGFAFSCLY SAMFVKTNRI FRIFSTRSAQ
721 RPRFISPISQ VVMTAMLAGV QLIGSLIWLS VVPPGWRHHY PTRDQVVLTC NVPDHHFLYS
781 LAYDGFLIVL CTTYAVKTRK VPENFNETKF IGFSMYTTCV VWLSWIFFFF GTGSDFQIQT
841 SSLCISISMS ANVALACIFS PKLWIILFEK HKNVRKQEGE SMLNKSSRSL GNCSSRLCAN
901 SIDEPNQYTA LLTDSTRRRS SRKTSQPTST SSAHDTFL
//