LOCUS       CAJ99897.1               258 aa    PRT              BCT 27-FEB-2015
DEFINITION  Helicobacter acinonychis str. Sheeba putative RNA polymerase
            sigma factor for flagellar operon protein.
ACCESSION   AM260522-1028
PROTEIN_ID  CAJ99897.1
SOURCE      Helicobacter acinonychis str. Sheeba
  ORGANISM  Helicobacter acinonychis str. Sheeba
            Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
            Helicobacteraceae; Helicobacter.
REFERENCE   1
  AUTHORS   Eppinger M., Baar C., Linz B., Raddatz G., Lanz C., Keller H.,
            Morelli G., Gressmann H., Achtman M., Schuster S.C.
  TITLE     Who ate whom? Adaptive Helicobacter genomic changes that
            accompanied a host jump from early humans to large felines
  JOURNAL   PloS Genet. 2(7), e120-e120(2006).
   PUBMED   16789826
REFERENCE   2  (bases 1 to 1553927)
  AUTHORS   Schuster S.C.
  JOURNAL   Submitted (27-MAR-2006) to the INSDC. Schuster S.C., Department of
            Biochemistry and Molecular Biology, Center for Comparative Genomics
            and Bioinformatics Center for Infectious Disease Dynamics, 310
            Wartik Building, Penn State University, University Park, PA 16802,
            USA Phone +1 814 863-9278, FAX +1 814 863-6699
COMMENT     Clone requests: scs@bx.psu.edu
FEATURES             Qualifiers
     source          /organism="Helicobacter acinonychis str. Sheeba"
                     /strain="Sheeba"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:382638"
     protein         /transl_table=11
                     /gene="fliA"
                     /locus_tag="Hac_1136"
                     /function="DNA-directed RNA polymerase specialized sigma
                     subunit"
                     /note="(P31804) RNA polymerase sigma factor for flagellar
                     operon (Sigma-F factor) (Sigma-27) (Sigma-28)"
                     /note="High confidence in function and specificity"
                     /db_xref="EnsemblGenomes-Gn:Hac_1136"
                     /db_xref="EnsemblGenomes-Tr:CAJ99897"
                     /db_xref="GOA:Q17WS9"
                     /db_xref="InterPro:IPR000943"
                     /db_xref="InterPro:IPR007627"
                     /db_xref="InterPro:IPR007630"
                     /db_xref="InterPro:IPR012845"
                     /db_xref="InterPro:IPR013324"
                     /db_xref="InterPro:IPR013325"
                     /db_xref="InterPro:IPR014284"
                     /db_xref="UniProtKB/TrEMBL:Q17WS9"
BEGIN
        1 MILTMENRMP QEIQQTEPSE KSEKNKEKVL NAYDKQQHHH QDALAIQYLP AVRAMAFRLK
       61 EHLPGSIDFN DLVSIGTEEL IKLARRYESA LNDSFWGYAK TRVNGAMLDY LRSLDVVSRS
      121 SRKLIKSIDF ETTKYLNEHG KEPSDEYLAQ ALGENIEKIR EAKTASDIYA LVPIDEQFNA
      181 IEQDEITKKI EVEELLEHVQ KVLNQMSERE QMLIQLYYFE ELNLSEIKEI LGITESRISQ
      241 IIKEAIKKVR QSLGASHG
//