LOCUS       CAH2171891.1             806 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing
            protein protein.
ACCESSION   BX284602-3057
PROTEIN_ID  CAH2171891.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="pqn-73"
                     /locus_tag="CELE_W01C9.3"
                     /standard_name="W01C9.3a"
                     /note="Confirmed by transcript evidence"
     intron_pos      22:1 (1/14)
     intron_pos      47:1 (2/14)
     intron_pos      74:0 (3/14)
     intron_pos      109:0 (4/14)
     intron_pos      189:2 (5/14)
     intron_pos      278:0 (6/14)
     intron_pos      346:0 (7/14)
     intron_pos      373:1 (8/14)
     intron_pos      605:0 (9/14)
     intron_pos      620:2 (10/14)
     intron_pos      653:2 (11/14)
     intron_pos      691:2 (12/14)
     intron_pos      763:0 (13/14)
     intron_pos      799:2 (14/14)
BEGIN
        1 MSRPNQIVTQ FPALDHEPRG QGPPPSYRNS AATEDSWSTM SGSGPNQAMS GQRRNSWNNL
       61 VQVGGDPIVQ KQPPPRPAAP MSTTFSVNSR TSSLMGLQQP TVFSTQFSAQ GQALPAQKVY
      121 SNDPRLVSIP RPAGTIPSLG SMPPSRSGSI ITGPNPSPPS SQKRKNKNKE SKSSLNKPKR
      181 NRLQELKNFC KKPSIMGCCL CLLLILIIAI IIIIILTQVL PSPKNATFTW MAPQSLTNGQ
      241 NSSSRIEMTS KKERIRFQTA GSPPIKGNYI NYYDFNSNQV VVIDQSLSAN GKNLYCFVLP
      301 LDRSSMPNPG DVRKAAKNSV LKHQQSDGWQ QVWSWLPSPL QQTNSGQSMF NPPIPECNGS
      361 RIIQLQQTSD QRNRRCTDCY DFCLPQFGIM KNASENNEEY LNIKQQDCFY LFVPEWRTYA
      421 QANTIEQNQQ DFENYYRNRQ HMQVSYGSNG PNDSRWIPLS GMPNRMMNAT GAFVGQVGNA
      481 IGDLRNNVYG MVTGQNQNPQ GAQQQQQYGN GNGQSPFQNT QYPNQNQNPS VAQMQQLQQQ
      541 NIQHQMQQSR QPSGYHPAVN GVVNLNGVNG NNGNTEYNVQ PYQGTGNQQT QNGQSISPEM
      601 RRQAPYSFNS NINSGYTNQQ PGVSSGNSNT NSNNMNGFGA QPSYRTSQFG FNNNDPRNQV
      661 GGLNGNGLGN SVNSEHQISV SAHTNAPRIG TVLNEFGNPV NVNPSQSSQQ NLQQQQLMNQ
      721 MNQQIPQYAG PVVNPNYIST SGGLALENRD ADGFSHRLQQ LMGTSSNYRP DVEPVNYNVP
      781 TYSQPNRPDA LSRQGRIFKR LLLDTV
//