LOCUS       CAG8860236.1             973 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans CBS domain-containing protein protein.
ACCESSION   BX284602-4183
PROTEIN_ID  CAG8860236.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="clh-1"
                     /locus_tag="CELE_T27D12.2"
                     /standard_name="T27D12.2c"
                     /note="Partially confirmed by transcript evidence"
     intron_pos      67:2 (1/17)
     intron_pos      110:2 (2/17)
     intron_pos      129:2 (3/17)
     intron_pos      179:1 (4/17)
     intron_pos      219:1 (5/17)
     intron_pos      263:1 (6/17)
     intron_pos      308:0 (7/17)
     intron_pos      362:1 (8/17)
     intron_pos      434:2 (9/17)
     intron_pos      468:2 (10/17)
     intron_pos      681:2 (11/17)
     intron_pos      760:2 (12/17)
     intron_pos      775:2 (13/17)
     intron_pos      818:0 (14/17)
     intron_pos      839:0 (15/17)
     intron_pos      875:0 (16/17)
     intron_pos      936:1 (17/17)
BEGIN
        1 MRRNSPRATI LFAVNPDKGA FPLLMTLPYE NYNNQATTSS ADTSGTTTTD LTSRRLESIA
       61 EDGSILKMED AVVVDEEHRR RGEDTQSSGQ SSLPSDIVQF TARPHMLMED VECSPIEPTE
      121 KEWNEYRDRV QENADQMELL GDDESSDTED QNDLDEEYED YYTDSKSTRR ETTKEFLTRQ
      181 FQNIVHFFVE DWFISAALGF ITAIFSIFID MGIEYLIHFR NFMLESLEQF NNYAAFCGWV
      241 FYITGLVYLA ALVCYGFGKQ AVGSGIPEVK VIIHGFQLKN YLSGKTLIAK MIGLTLTIGS
      301 GLPVGKEGPF VHIGAIVASL LNKVTAACQY NAFFSNEGRA MEMLSIGCAV GIACTFSAPM
      361 GAVLYGIEST SKYFAVKNYW RSFFATTCSA MLFRFAIAFF VPQHIAGTIT AYYQTYFPNE
      421 VFVVEELPFF IGLGVMTGLL GALFVYYHRR IAFFKRKNRI FQALFGKSPI LFTACCAAIF
      481 AVLVYPNGLG SYVAGKYTFR ETLVDFLSNC TLWKQTNGSE GCPPHMLEHW SGPEGDMMPI
      541 NSLLIYFLFY FIIVPICITL YIPSGIFVPC FVIGACGGRI FGEIISMIWP YGLRGLGQPQ
      601 IYPGLYAVVG AASFTGSVTH SLSIALIVCE TTGQLCALLP VLIALMISNA ICAFLQPSIY
      661 DSIIKINGYP YLADLPPSRM SVHQMKVERI MVKDIFYITR ETTYRELREM LLESPTLRSY
      721 PFVTDSRSMT LLGSVARKYL LYLIQRKLGP EPELFGHRRR SRTASEIFST INNLRKYSRR
      781 GSLAANGAHM SSGNALMTDR NISGNTLLPQ SPLHEDQGDR SPLAPLLYAQ TNQHEPIVHS
      841 LAKRAEILSK KLDMEEVAID PAPFQLVRGT SLYKVHTLFS LLALNHAYVT EKGRLCGVVA
      901 VKELREALSN IYSRGAVVPK QRIRTSTFRL NPEQDLDREL QNGHTAEPNG APIRQPRVTI
      961 DVPENAKTDD ETR
//