LOCUS CAD57714.1 1072 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Serine/threonine-protein kinase mig-15 protein. ACCESSION BX284606-2463 PROTEIN_ID CAD57714.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="mig-15" /locus_tag="CELE_ZC504.4" /standard_name="ZC504.4d" /note="Partially confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00003247" /db_xref="EnsemblGenomes-Tr:ZC504.4c" /db_xref="WormBase:WBGene00003247" intron_pos 16:0 (1/15) intron_pos 72:0 (2/15) intron_pos 138:0 (3/15) intron_pos 218:1 (4/15) intron_pos 266:1 (5/15) intron_pos 356:1 (6/15) intron_pos 380:2 (7/15) intron_pos 421:0 (8/15) intron_pos 607:0 (9/15) intron_pos 636:0 (10/15) intron_pos 673:0 (11/15) intron_pos 834:0 (12/15) intron_pos 946:0 (13/15) intron_pos 972:1 (14/15) intron_pos 1046:0 (15/15) BEGIN 1 MSSSGLDEID LNSLRDPAGI FELIEVVGNG TYGQVYKGRH VKTAQLAAIK IMNINEDEED 61 EIKLEINMLK KHSHHRNVAT YYGAFIKKLP SSTGKHDQLW LVMEFCGSGS ITDLVKNTKG 121 GSLKEEWIAY ICREILRGLY HLHQSKVIHR DIKGQNVLLT DSAEVKLVDF GVSAQLDKTV 181 GRRNTFIGTP YWMAPEVIAC DESPEATYDS RSDLWSLGIT ALEMAEGHPP LCDMHPMRAL 241 FLIPRNPPPK LKRNKKWTKK FETFIETVLV KDYHQRPYTG ALLRHPFIKE QPHEQTIRHS 301 IKEHIDRNRR VKKDDADYEY SGSEDDEPSP NNRGPSMGIR DDSESSSMIP MDNTLQPGAQ 361 QLRRLPQQPA PAPFQYQQSR YVEPRRESSE VKLRAVSSRG AADGPRHSPA SRPRPVSHHQ 421 RSPQQSHPAA PHLADLANYE KRRRSEREER RERERQAHHA MPIARVSASV PAPQQSRKMS 481 EPLLITHVKP EDLDVLASEL SKMGGHHNGR SREESMSPPP PAPPPREASI SSITDTIDVG 541 ELDNGADAEW DDLKDIMMNG EGTLRGPNKP LPPTPTDGEN TLVSDVRRNG NGNSGHGAYK 601 GKKIPEIRPG IISLDDDDSD SDNEEGNEPL MFKPINASSS RGALPDLLPK SPQLRRQIND 661 QTRQMSDDRA DEQPNGFQNS DSRSSIQHSF SNRDREKSFV GYFGGGAGAG GGTVNRPGRP 721 QDINQVQVNV TPNSNGTPAE NDAPEIRKYK KKFSGEILCA ALWGVNLLIG TDSGLMLLDR 781 SGQGKVYPLI SRRRFDQMTV LEGQNILATI SGRKRRIRVY YLSWLRQKIL RTEGAGSANT 841 TEKRNGWVNV GDLQGAIHFK IVRYERIKFL VVGLESSIEI YAWAPKPYHK FMSFKSFGSL 901 SHVPLIVDLT VEDNARLKVL YGSTGGFHAI DLDSAAVYDI YTPAQSGQTT TPHCIVVLPN 961 SNGMQLLLCY DNEGVYVNTY GRMTKNVVLQ WGEMPSSVAY ISTGQIMGWG NKAIEIRSVD 1021 TGHLDGVFMH KKAQKLKFLC ERNDKVFFSS AKGGGSCQIY FMTLNKPGLT NW //