LOCUS       CAD44161.1               770 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans PH domain-containing protein protein.
ACCESSION   BX284606-3304
PROTEIN_ID  CAD44161.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="obr-3"
                     /locus_tag="CELE_ZK1086.1"
                     /standard_name="ZK1086.1b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00014215"
                     /db_xref="EnsemblGenomes-Tr:ZK1086.1b"
                     /db_xref="GOA:Q8MPR9"
                     /db_xref="InterPro:IPR000648"
                     /db_xref="InterPro:IPR001849"
                     /db_xref="InterPro:IPR011993"
                     /db_xref="InterPro:IPR037239"
                     /db_xref="UniProtKB/TrEMBL:Q8MPR9"
                     /db_xref="WormBase:WBGene00014215"
     intron_pos      51:0 (1/10)
     intron_pos      115:0 (2/10)
     intron_pos      145:0 (3/10)
     intron_pos      183:0 (4/10)
     intron_pos      208:0 (5/10)
     intron_pos      290:0 (6/10)
     intron_pos      352:2 (7/10)
     intron_pos      548:0 (8/10)
     intron_pos      638:2 (9/10)
     intron_pos      718:0 (10/10)
BEGIN
        1 MLERRKERKL TITSPNEDMR IVEPPAHKQR RASLSVAYHR LLSFSSSPIK KQKKEYRDEK
       61 KRVNDELLSA LRDPTVVVMA DTLKIRGALK RWNRYYCVLK PGLLILYKHK KADRGDWVGT
      121 VLLNHCELIE RPSKKDGFCF KLFHPMDMSI WGNRGPLGQS FGSFTLNPLN TSFLICRAPS
      181 DQAGRCWMDA LELSFKCTGL LKKTMNELDD KNGDSSMNDG QRDESRMSRD SDGDDTRELA
      241 VSETDAEKHF QEIDDVQDED HEDGKMSETS DTIREAFTES AWIPSPKEVF GPDGSLTEEV
      301 GEENKSLIWT LLKQIRPGMD LSKVVLPTFI LEPRSFLEKL ADYYYHADLI SEAVAEPDPF
      361 QRIVKVTKFF LSGFYKKPKG LKKPYNPILG ETFRCKWEHP DGSTTFYMAE QVSHHPPVSS
      421 LFITNRKAGF NISGTILAKS KYYGNSLSAI LAGKLRLTLL NLGETYIVNL PYANCKGIMI
      481 GTMTMELGGE VNIECEKTGY RTTLDFKLKP MLGGAYNQIE GSIKYGSDRL ASIEGAWDGV
      541 IRIKGPDGKK ELWNPTPEVI KTRLPRYEIN MDEQGEWESA KLWRHVTEAI SNEDQYKATE
      601 EKTALENDQR ARAKSGIPHE TKFFKKQHGD DYVYIHADYR PWDNNNDIQQ IENNYVVKTI
      661 SRHSKRKTGN SEQLGSDNTS EASESDEEVI EPKIKKKEIV PAKSKPITPE VADERIKEME
      721 RKFELAIRRM EAANERQSSR TLNAIQSTLL FVFVVTSVVQ SIFMFFMLRK
//