LOCUS CAD42646.2 972 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans EOR-2 protein. ACCESSION BX284606-3504 PROTEIN_ID CAD42646.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="eor-2" /locus_tag="CELE_C44H4.7" /standard_name="C44H4.7a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00001325" /db_xref="EnsemblGenomes-Tr:C44H4.7a" /db_xref="GOA:G5EE70" /db_xref="UniProtKB/TrEMBL:G5EE70" /db_xref="WormBase:WBGene00001325" intron_pos 24:1 (1/16) intron_pos 68:0 (2/16) intron_pos 125:0 (3/16) intron_pos 158:0 (4/16) intron_pos 299:0 (5/16) intron_pos 352:1 (6/16) intron_pos 367:1 (7/16) intron_pos 397:0 (8/16) intron_pos 499:1 (9/16) intron_pos 597:2 (10/16) intron_pos 641:0 (11/16) intron_pos 689:0 (12/16) intron_pos 745:1 (13/16) intron_pos 791:1 (14/16) intron_pos 847:0 (15/16) intron_pos 925:0 (16/16) BEGIN 1 MDQRNQKSLL PDFSANGFSG QFNGIPHGNT NAIMSTIQSL QMHSMGNQLL PHGDLQTDLQ 61 NQFLIEQFQL RAMQSMYNTF NNGNQKQPQA SLTMSQFNSM TGNEPSTSSN VFSASIPTTS 121 GTQINASQPM IPTTSMHNLA VQSSMMLENK LGQNLNLKTT QLAQTTIPQA QAAVEDWMKN 181 ICVDSLLDPK QAKTPSTTPS AQVSAGTTFN STPAVSCATP LTATVSLATK PSEPSAASSM 241 PTSSESVDAT KGDAIDFDDE AHDDVDNIFG LSLSESDVRS GSMYRRPDSA DRVHSPIDFT 301 PPDSPQAELT FDEIFGISAP STSAKAATKE KPVPKPRSEM VFHDVPSTSK DDIATGTRGN 361 KEFPAIATPQ RVPKPAPTAA SKEEDDFVNN FVKPQNVPVY KQKAALMSLE ARENARKEDP 421 NYDAFEFEDD DDFVFGGPSA DLRREPELTK KIEQKAKSVY ITGVGFSIRN DKEKEYSSKK 481 YYSKPSATHQ PNFNDTINEK AFFTTADEIR AQKDQQLVCA FLKPEQVTST ECVRNMRKVT 541 REEPMLPKFI IRVEQVQNQH EEPMTRRRYK RKKNKSDNDD SDFEDVAYRK RKTAKKVYTM 601 HKENDPTFRR TVLDFSIGPC VSDEEKKRVS MFGPAEGILP KGTYVICKAD MLKEDCAVWR 661 VDNQNLLQKF PPFRDSKANR LVYRSSSTYS GWCEQISSQY FRVAVKIIKQ TRSETTVEPE 721 VPLAELFPAS SVEWFKNPGT VFFEEETKVE PIDDDSILTE PRRVSLNTLV NAYLTQVFTK 781 THVESLIDDK DWTYSRSIAE LETNNKQCEG LIKKRIPVEP KHNRWIAKYT RLAISKSSFH 841 CFTKCQICKR KKPRRVIHFF DKTSCNEKLL VENLSSDIHD ENEDDEEYPI VSDAISCGRC 901 SMAVDFLHRM HHIKFHMLRI CEDKLEEIGT SDIDLTSDKI VEKAKADKVW TLGVIQKYCD 961 LWDQVRYEFR DV //