LOCUS CAC70079.1 639 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Actin-binding lim zn-finger protein limatin involved in axon guidance protein. ACCESSION BX284606-2392 PROTEIN_ID CAC70079.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="unc-115" /locus_tag="CELE_F09B9.2" /standard_name="F09B9.2b" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00006839" /db_xref="GOA:Q95QM5" /db_xref="InterPro:IPR001781" /db_xref="InterPro:IPR003128" /db_xref="InterPro:IPR036886" /db_xref="UniProtKB/TrEMBL:Q95QM5" /db_xref="WormBase:WBGene00006839" intron_pos 47:1 (1/10) intron_pos 130:1 (2/10) intron_pos 204:0 (3/10) intron_pos 252:0 (4/10) intron_pos 328:1 (5/10) intron_pos 365:0 (6/10) intron_pos 445:2 (7/10) intron_pos 478:1 (8/10) intron_pos 547:1 (9/10) intron_pos 598:2 (10/10) BEGIN 1 MKFSRPVLSV NHLILGKKCD VCRKKCSGDV LKANDKYFHI NCFQCKKCGR NLGETGFYTT 61 PENAYLCPDD FRAVSKEITV KTTTQQAHAS SSSAATPKSP EKSNGTTDVS SSGAANATLQ 121 QISPLGSPTT CAACDQALHS GQVLLALGLS WHVYCFKCSE CSAVLHGEYM SHHGKPLCLR 181 DYNEKFGVKC YECEKFIAGK VLQAGGYKFH PTCARCSRCG SHFGDGEEMY MQGDEIWHPS 241 CEHARTTENI APTGRAATLS RNEPKYQSTF GQHQAYMYLL PEVEQTYLRH PVMNAKEPNA 301 PQYHVPQGPI KIRKSRMSML KTGMQRLTED LEKNIPRPKS PHMDNEEPIE LAHYPAAHVP 361 DPDTLPAIER EDFPAPQFPY AVEELKRRLS TSSVENEISD DEYSESDKVD EDKLRKTVET 421 LEKYNDSSIA HVIRQNIEDS HKKQRLPLHW DPRNASRTPS GKKMPHLKFR YDVPINASPS 481 RHLNRPRPWV VWQGGERDQG NNTLPCFHIP EDSRANTLRA ATLPTEFGQN LSLENLDTTI 541 SSHYSEHSTT ESGTAGGPRS AGGAVLRSSL PDMSKPAKQY DLLFLQTTNS DLPEDVDRQH 601 LERHLPRDQF EEIFKMSLIE FYKLPEWKRI NLKRKHKLF //