LOCUS       CAC70079.1               639 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Actin-binding lim zn-finger protein
            limatin involved in axon guidance protein.
ACCESSION   BX284606-2392
PROTEIN_ID  CAC70079.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="unc-115"
                     /locus_tag="CELE_F09B9.2"
                     /standard_name="F09B9.2b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00006839"
                     /db_xref="GOA:Q95QM5"
                     /db_xref="InterPro:IPR001781"
                     /db_xref="InterPro:IPR003128"
                     /db_xref="InterPro:IPR036886"
                     /db_xref="UniProtKB/TrEMBL:Q95QM5"
                     /db_xref="WormBase:WBGene00006839"
     intron_pos      47:1 (1/10)
     intron_pos      130:1 (2/10)
     intron_pos      204:0 (3/10)
     intron_pos      252:0 (4/10)
     intron_pos      328:1 (5/10)
     intron_pos      365:0 (6/10)
     intron_pos      445:2 (7/10)
     intron_pos      478:1 (8/10)
     intron_pos      547:1 (9/10)
     intron_pos      598:2 (10/10)
BEGIN
        1 MKFSRPVLSV NHLILGKKCD VCRKKCSGDV LKANDKYFHI NCFQCKKCGR NLGETGFYTT
       61 PENAYLCPDD FRAVSKEITV KTTTQQAHAS SSSAATPKSP EKSNGTTDVS SSGAANATLQ
      121 QISPLGSPTT CAACDQALHS GQVLLALGLS WHVYCFKCSE CSAVLHGEYM SHHGKPLCLR
      181 DYNEKFGVKC YECEKFIAGK VLQAGGYKFH PTCARCSRCG SHFGDGEEMY MQGDEIWHPS
      241 CEHARTTENI APTGRAATLS RNEPKYQSTF GQHQAYMYLL PEVEQTYLRH PVMNAKEPNA
      301 PQYHVPQGPI KIRKSRMSML KTGMQRLTED LEKNIPRPKS PHMDNEEPIE LAHYPAAHVP
      361 DPDTLPAIER EDFPAPQFPY AVEELKRRLS TSSVENEISD DEYSESDKVD EDKLRKTVET
      421 LEKYNDSSIA HVIRQNIEDS HKKQRLPLHW DPRNASRTPS GKKMPHLKFR YDVPINASPS
      481 RHLNRPRPWV VWQGGERDQG NNTLPCFHIP EDSRANTLRA ATLPTEFGQN LSLENLDTTI
      541 SSHYSEHSTT ESGTAGGPRS AGGAVLRSSL PDMSKPAKQY DLLFLQTTNS DLPEDVDRQH
      601 LERHLPRDQF EEIFKMSLIE FYKLPEWKRI NLKRKHKLF
//