LOCUS CAC35828.2 802 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Glutamate 5-kinase protein. ACCESSION BX284606-3071 PROTEIN_ID CAC35828.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="alh-13" /locus_tag="CELE_T22H6.2" /standard_name="T22H6.2b" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00011938" /db_xref="EnsemblGenomes-Tr:T22H6.2b" /db_xref="WormBase:WBGene00011938" intron_pos 25:0 (1/8) intron_pos 60:2 (2/8) intron_pos 113:0 (3/8) intron_pos 153:2 (4/8) intron_pos 238:0 (5/8) intron_pos 363:1 (6/8) intron_pos 546:0 (7/8) intron_pos 700:1 (8/8) BEGIN 1 MFRATRCLRL PLRNSHINIL RPTQTELIKT RSSALAPYEK VSPITAVGAT PVGVGNGNYC 61 YSTKTRQKHP LINTRNDLKK AQRVVVKLGS AVITREDECG LALGRLASIV EQVSELQQSG 121 RQMLIVSSGA VAFGRQKLRQ ELVMSMSMRQ TLRGPSGMTA DKRACAASGM PGLMSLYEQL 181 FQQYGITVAQ VLLTKPDIDD DQRRKNLQAT IESLLSLNII PIVNANDAVA PDPKLNMHIS 241 DNDSLAARLS AEIEAELLII LSNVNGVYTG PPDLEGSRLL YTYVPSENSG VTFGANSKFG 301 TGGMESKVTA CVNALNNGVT TVITNGLAQD AITDAVAGKK IGTMFCNTKG YEGPPIEEVA 361 EKCRDAGRQL AALSNKERGA MVRHLAALLV DKEKYIIEAN QTDLANAKSA GLDPQLLNRL 421 KMTPEKIQDL HAGLNTIADS AETLVGRVLK KVKISEGLFL EQVTVPIGSL MVIFESRPDC 481 LPQVASLAMA SGNALLLKGG KEAEESNKAL HALVQEALGT HGFEMRDAVT LVRSREDVAD 541 LLQLKDLIDL IIPRGSSDLV RSMQEKSKGI PVLGHAEGVC HVYIDKDCDE QKAIQIVRDS 601 KCDYPSACNA AETILIHKDL ATAPFFDSLC SMFKAEGVKL HAGPKLAALL KFAPPPAESM 661 SFEYGSLECT LEVVDNVEEA VAHIIRYGSG HTESIITENT NTAEHFLKHV DSACAFHNAS 721 TRFADGYRFG LGAEVGISTG RIHARGPVGV EGLLTTKWLL RGEGHLVEDF KNGKYSYLHE 781 NLNPSEVYRA LDAAGELKKA TA //