LOCUS CAC35810.1 570 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Serine/threonine-protein kinase flr-4 protein. ACCESSION BX284606-3615 PROTEIN_ID CAC35810.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="flr-4" /locus_tag="CELE_F09B12.6" /standard_name="F09B12.6" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00001468" /db_xref="EnsemblGenomes-Tr:F09B12.6" /db_xref="WormBase:WBGene00001468" intron_pos 12:0 (1/11) intron_pos 54:0 (2/11) intron_pos 87:0 (3/11) intron_pos 118:2 (4/11) intron_pos 154:0 (5/11) intron_pos 245:2 (6/11) intron_pos 327:0 (7/11) intron_pos 349:0 (8/11) intron_pos 419:1 (9/11) intron_pos 487:2 (10/11) intron_pos 509:2 (11/11) BEGIN 1 MPINYNRNAV ELKLSSQLLQ WLDQRLPLGD PMRIPSIDSY KYIQDLGKGR FGTVCKFSNG 61 NTFETVKKVD LTIFNHWTQS ETKVSNRLDT FLYEFRHLHK VTNDNNRIVN FLGIYADSNQ 121 MYIMSEYLPR GSVKDLLVKE TLGEDTAIKY LMETVEALDY LHNLSPPVIH RDIKAANLLI 181 TSNDSIKLAN FGLVRDLAVD GFGIAIASEI TLDFRATLLY VAPEVLSSAL GPGNRNAYEL 241 PADIWALGCT FIEMLLKRPP HFEYFGHIDE IPKVLLGYAK SEDGKVLPYT SEVLVPSSSN 301 CVQKIVDLVF IKSPEHRPNT HKLRIQIKKI LDDDSESEEE TDISHPISNS NTDSSTAISH 361 NHSNDRKVGR AGTCLPIESM EYAAVRKELK KRSKPKSNNI MQIFVASGYY LSRILYFLNI 421 LTRSICYLLL FLSLGITALG SFLLISYFVV RFVRYLIAIN CNCDLMQPQY LIISGILIVL 481 MFALLFSCCM VALGEYKFRM ANQTLDGSKF YLPRPQKSAV LCGITVITGK EDAKDTAQNM 541 EEEIHLTPSV RRNHDDYYYD ESSGPANEEN //