LOCUS CAB60377.4 756 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Uncharacterized protein protein. ACCESSION BX284602-4476 PROTEIN_ID CAB60377.4 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 15279421) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="II" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="Y46G5A.29" /locus_tag="CELE_Y46G5A.29" /standard_name="Y46G5A.29" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00012917" /db_xref="EnsemblGenomes-Tr:Y46G5A.29" /db_xref="GOA:Q9U2D5" /db_xref="InterPro:IPR000152" /db_xref="InterPro:IPR000742" /db_xref="InterPro:IPR001881" /db_xref="InterPro:IPR002861" /db_xref="InterPro:IPR003582" /db_xref="InterPro:IPR012674" /db_xref="InterPro:IPR013032" /db_xref="InterPro:IPR014878" /db_xref="InterPro:IPR018097" /db_xref="UniProtKB/TrEMBL:Q9U2D5" /db_xref="WormBase:WBGene00012917" intron_pos 40:2 (1/11) intron_pos 83:1 (2/11) intron_pos 126:1 (3/11) intron_pos 168:2 (4/11) intron_pos 306:0 (5/11) intron_pos 368:1 (6/11) intron_pos 443:1 (7/11) intron_pos 480:1 (8/11) intron_pos 517:1 (9/11) intron_pos 564:1 (10/11) intron_pos 629:2 (11/11) BEGIN 1 MIILSILSLL TFDLVIGSDL DANHFFKGLY ETSGFHCYSR DSMRLPRHLH GRPQTTDPPF 61 DLSVFDASGK RVESYEIGKV YTVKLEAYVH FRGLMLQPRL CTQSGAIIGS LRGGKFIEDE 121 QFETHGLMFH QCGRLVTNDS LTHTGDDKKF LAEAKWQATR DVGNVQFVAT IATENVVYWE 181 KWRPRHAFLK GPYQKYSTQN PNIFIYNLEK DIEQRTSEKV VTSEPVLPSQ HPLFEEQREI 241 LKAKMVTPLP VTVASLAETS ENSDDVFDFD GLTFESPATA NKIQVTAASM MMGDKAGSTR 301 APEISHSSKF LIEKPSESTF MMGRMFKKFA PLNDTVLQED DLKFLNSHVH HRMLQHDFVD 361 NNDLEMEEKC QDNPCQNGGR CSMSKGKSTC QCNPGYVGAN CTEIDKCLDN ECDNNSTCFN 421 DKRSPVGYSC KCQNGTVGKL CEIECPKDQC ENGGQCYLNT FGKIGCKCVP GTTGRRCERE 481 INECGWNSCK NGAKCVDLFN DYRCDCADGW MGRNCERPCQ DIYGSCRVWK REGQCQEMRN 541 ATDFFDLNCA ASCGVCVKVD NGTDESYLPL QPILMPFAFL LGEWESTIKG WNNHTTDYPA 601 DMDGMIYNET ITFSVAPSLS FGTPFVNYTA TMTSLDDPSN IHQYNGFLTI QQYKDNENST 661 DRGALTTVSN TGLIMIEEGD ILDEKSSSEG APTLMLTPTY QFYKSETKNP ARHPERSKRW 721 FTVKNKRLMQ YMVREFKGRT HKFTKIYKKK TEFKYL //