LOCUS       CAB60331.2               494 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans RING-type E3 ubiquitin transferase protein.
ACCESSION   BX284606-3669
PROTEIN_ID  CAB60331.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="Y15E3A.3"
                     /locus_tag="CELE_Y15E3A.3"
                     /standard_name="Y15E3A.3"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00012442"
                     /db_xref="EnsemblGenomes-Tr:Y15E3A.3"
                     /db_xref="UniProtKB/TrEMBL:Q9U2R4"
                     /db_xref="WormBase:WBGene00012442"
     intron_pos      23:1 (1/11)
     intron_pos      81:0 (2/11)
     intron_pos      118:1 (3/11)
     intron_pos      146:0 (4/11)
     intron_pos      198:0 (5/11)
     intron_pos      239:2 (6/11)
     intron_pos      310:1 (7/11)
     intron_pos      356:2 (8/11)
     intron_pos      386:2 (9/11)
     intron_pos      420:0 (10/11)
     intron_pos      459:0 (11/11)
BEGIN
        1 MDISTTSSSR SDNEDLENTE ETAQQWIYRH LIEFTNCEDT SARSLVDGDC SPLIQLLTDM
       61 TQTKSLFITV TKPVVVDFSA ISLDPLPVPT PEVPPAKKTT KKKGKLQALK KKKKKTKSSK
      121 IKVEPKKKEK VVPEIVEPPP PIVDAIVDMI FEWWTLIDLP HHEQFMFIIP KSRVPNIDAR
      181 LDELYHVGFM KNRRLLKAAL SCLDTVFYDK TTFAMKIDLL LHINEIEDMK MSKELIFERF
      241 ILENIARNFN LNGRIRNIDS DARSITLILS QTIQTFCFQP DMGERTRLLI QLSFFDIEYL
      301 GSFPDIEITA ARLEKALCHI SLLQFLYKED ISDWTRKTYL YLLDLFSTIL AHEITKKSNF
      361 MTNYSPENKV GPICASFKKV VQKLVSVSRE VFETQEDWSA TNKVSFSFYI VGILEEEIDS
      421 IIEKVEEMNS EARDMSLDRS AMQATKVILT ELDAYLQEKC LESAVESGNL ESLRSLAATI
      481 VKHNKRLERV VALY
//