LOCUS       CAB5248305.1              71 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 possible
            antitoxin vapb26 protein.
ACCESSION   LT708304-604
PROTEIN_ID  CAB5248305.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="vapb26"
                     /locus_tag="BQ2027_MB0596"
                     /note="Mb0596, -, len: 71 aa. Equivalent to Rv0581, len:
                     71 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 71 aa overlap). Conserved hypothetical
                     protein, showing weak similarity to several Mycobacterium
                     tuberculosis proteins including
                     P95003|Z83863|Rv2550c|MTCY159_6 CONSERVED HYPOTHETICAL
                     PROTEIN (81 aa), FASTA scores: opt: 93, E(): 3.2, (25.7%
                     identity in 70 aa overlap); Rv2871; Rv1241; etc. Also
                     shows weak similarity to X05648|SGSPH_1 from Streptomyces
                     glaucescens (77 aa), FASTA scores: opt: 92, E(): 3.6,
                     (35.4% identity in 65 aa overlap). Protein product from
                     Mb0596 detected using SWATH mass spectrometry. Mb0596
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
BEGIN
        1 MDKTTVYLPD ELKAAVKRAA RQRGVSEAQV IRESIRAAVG GAKPPPRGGL YAGSEPIARR
       61 VDELLAGFGE R
//