LOCUS CAB5248133.1 498 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 POSSIBLE LIPOPROTEIN PEPTIDASE LPQM protein. ACCESSION LT708304-432 PROTEIN_ID CAB5248133.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="lpqM" /locus_tag="BQ2027_MB0427" /note="Mb0427, lpqM, len: 498 aa. Equivalent to Rv0419, len: 498 aa, from Mycobacterium tuberculosis strain H37Rv, (99.8% identity in 498 aa overlap). Possible lpqM, lipoprotein peptidase (EC 3.4.-.-); has potential N-terminal signal peptide and contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site, PS00142 Neutral zinc metallopeptidases, zinc-binding region signature. Protein product from Mb0427 detected using SWATH mass spectrometry. Mb0427 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." BEGIN 1 MHGRGRYRPL VRCVRPRRVA ASVRTPIACL AAVVVIAGCT TVVDGRALSI LNDPFRVGGL 61 PATNGPSGAR PDAPAASGTV INTNNGAIDK LSLLSVNDIE DYWMAVYSES LKGTFRPVGK 121 LVSYDSNDPS SPIVCHIDTY QLVNAFFSSR CNLIAWDRGV FMAVAQEYFG DMSVNGVLAH 181 EFGHALQVMA NLVTRKDPTI VREQQADCFA GVYLWWVAEG KSTRFTLSTA DGLDHVLAGI 241 ITTRDPVMEA DAENDDEHGS ALDRVSAFQL GFINGTPACA AIDEDEVERR RGDLPTTLRV 301 DASGNPETGE VGINEETLST LMELMGKIFS PKNPPTLSYQ PAGCPDAKPS PPAAYCPATN 361 TIVVDLPALA RMGKVASAAE HSLPQGDDTS LSIVMSRYAL AVQHERGLPM QSPWTALRTA 421 CLTGVAHRKM AVPIDLPSGQ QLVLTAGDLD EAVSGLLTNR MVASDADGVS VPAGFTRIAA 481 FRAGVGGDMD ACYARYPG //