LOCUS       CAB5248096.1             848 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            ENDOPEPTIDASE ATP BINDING PROTEIN (CHAIN B) CLPB (CLPB
            PROTEIN) (HEAT SHOCK PROTEIN F84.1) protein.
ACCESSION   LT708304-395
PROTEIN_ID  CAB5248096.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="clpB"
                     /locus_tag="BQ2027_MB0391C"
                     /standard_name="htpM"
                     /note="Mb0391c, clpB, len: 848 aa. Equivalent to Rv0384c,
                     len: 848 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 848 aa overlap). Probable clpB
                     (alternate gene name: htpM), endopeptidase ATP-binding
                     protein, chain B (EC 3.-.-.-), equivalent to
                     AC32007.1|AL583925 heat shock protein from Mycobacterium
                     leprae (848 aa). Also highly similar to others e.g.
                     P53532|CLPB_CORGL|1163118|AAB49540.1|U43536|CGU43536_1
                     CLPB PROTEIN (heat-inducible expression) from
                     Corynebacterium glutamicum (852 aa), FASTA scores: opt:
                     4113, E(): 0, (74.5% identity in 846 aa overlap);
                     T36551|4753885|CAB42048.1|AL049754|clpB|SCOEDB|SCH10.39c
                     probable ATP-dependent proteinase ATP-binding chain from
                     Streptomyces coelicolor (853 aa);
                     P03815|CLPB_ECOLI|1788943|AAC75641.1|AE000345 CLPB PROTEIN
                     (HEAT SHOCK PROTEIN F84.1) from Escherichia coli strains
                     K12 and O157:H7 (857 aa); etc. Also similar to
                     Rv3596c|ClpC from Mycobacterium tuberculosis. Contains
                     PS00870 and PS00871 Chaperonins clpA/B signatures and two
                     PS000017 ATP/GTP-binding site motives A (P-loop). BELONGS
                     TO THE CLPA/CLPB FAMILY. Contains probable coiled-coil
                     domain from aa 411-503. Protein product from Mb0391c
                     detected using shotgun mass spectrometry and SWATH mass
                     spectrometry. Mb0391c found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
                     /experiment="experimental evidence, no additional details
                     recorded"
BEGIN
        1 MDSFNPTTKT QAALTAALQA ASTAGNPEIR PAHLLMALLT QNDGIAAPLL EAVGVEPATV
       61 RAETQRLLDR LPQATGASTQ PQLSRESLAA ITTAQQLATE LDDEYVSTEH VMVGLATGDS
      121 DVAKLLTGHG ASPQALREAF VKVRGSARVT SPEPEATYQA LQKYSTDLTA RAREGKLDPV
      181 IGRDNEIRRV VQVLSRRTKN NPVLIGEPGV GKTAIVEGLA QRIVAGDVPE SLRDKTIVAL
      241 DLGSMVAGSK YRGEFEERLK AVLDDIKNSA GQIITFIDEL HTIVGAGATG EGAMDAGNMI
      301 KPMLARGELR LVGATTLDEY RKHIEKDAAL ERRFQQVYVG EPSVEDTIGI LRGLKDRYEV
      361 HHGVRITDSA LVAAATLSDR YITARFLPDK AIDLVDEAAS RLRMEIDSRP VEIDEVERLV
      421 RRLEIEEMAL SKEEDEASAE RLAKLRSELA DQKEKLAELT TRWQNEKNAI EIVRDLKEQL
      481 EALRGESERA ERDGDLAKAA ELRYGRIPEV EKKLDAALPQ AQAREQVMLK EEVGPDDIAD
      541 VVSAWTGIPA GRLLEGETAK LLRMEDELGK RVIGQKAAVT AVSDAVRRSR AGVSDPNRPT
      601 GAFMFLGPTG VGKTELAKAL ADFLFDDERA MVRIDMSEYG EKHTVARLIG APPGYVGYEA
      661 GGQLTEAVRR RPYTVVLFDE IEKAHPDVFD VLLQVLDEGR LTDGHGRTVD FRNTILILTS
      721 NLGSGGSAEQ VLAAVRATFK PEFINRLDDV LIFEGLNPEE LVRIVDIQLA QLGKRLAQRR
      781 LQLQVSLPAK RWLAQRGFDP VYGARPLRRL VQQAIGDQLA KMLLAGQVHD GDTVPVNVSP
      841 DADSLILG
//