LOCUS       CAB5248084.1             251 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 Aerobic
            carbon monoxide dehydrogenase molybdenum cofactor insertion
            protein CoxF protein.
ACCESSION   LT708304-383
PROTEIN_ID  CAB5248084.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB0379C"
                     /note="Mb0379c, -, len: 251 aa. Equivalent to Rv0372c,
                     len: 251 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.6% identity in 251 aa overlap). Conserved hypothetical
                     protein, showing some similarity with
                     CAB76248.1|X82447|COXF CoxF protein from
                     Pseudomonas/Oligotropha carboxidovorans (280 aa);
                     AJ224684|BJAJ4684_6 cooxS from Bradyrhizobium japonicum
                     (176 aa), FASTA scores: opt: 186, E(): 1.6e-05, (41.1%
                     identity in 95 aa overlap). Also similar to upstream ORF
                     Rv0376c from Mycobacterium tuberculosis (380 aa), FASTA
                     scores: E(): 6.8e-07, (31.0% identity in 277 aa overlap).
                     Mb0379c found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing."
BEGIN
        1 MSISDRAAQL VAARTPFVRA TVVRAQQPTS ARPGDEAILL ADGTIEGFVG GHCAQNSVRK
       61 AAMGVLQAGE SVLLRVLPDG DVHFPEAPGA CVVVNPCLAG GSLEIFLTPQ LPAPLIQIYG
      121 ETPIADALIE LCGLLGYDAR RDTDPADTDA LPTAIVIASH SGPEAEIIRT ALDNGVGYVG
      181 LVASTVRGAS ILDSLDLSDA ERARVHTPVG LAIGAKTPAE IAVSIAAELI ATLRGGGPRG
      241 RKALADENGG A
//