LOCUS       CAB5248031.1             256 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 possible
            glycerophosphoryl diester phosphodiesterase glpq2 (glycerophosphodie
            ster phosphodiesterase) protein.
ACCESSION   LT708304-330
PROTEIN_ID  CAB5248031.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="glpQ2"
                     /locus_tag="BQ2027_MB0325C"
                     /note="Mb0325c, glpQ2, len: 256 aa. Equivalent to Rv0317c,
                     len: 256 aa (start uncertain, chosen by homology), from
                     Mycobacterium tuberculosis strain H37Rv, (100.0% identity
                     in 256 aa overlap). Possible glpQ2, glycerophosphoryl
                     diester phosphodiesterase (EC 3.1.4.46), similar to others
                     e.g. E75317|6459876|AAF11631.1|AE002044_4
                     glycerophosphoryl diester phosphodiesterase from
                     Deinococcus radiodurans (285 aa); P10908|UGPQ_ECOLI from
                     Escherichia coli (247 aa), FASTA scores: opt: 220, E():
                     5.2e-07, (28.0% identity in 250 aa overlap). Also similar
                     to MTCY01A6.27 from Mycobacterium tuberculosis FASTA
                     score: (27.5% identity in 247 aa overlap). Protein product
                     from Mb0325c detected using shotgun mass spectrometry and
                     SWATH mass spectrometry. Mb0325c found to be expressed
                     during exponential growth in Sauton's minimal media by
                     RNA-sequencing."
BEGIN
        1 MEFLRHGGRI AMAHRGFTSF RLPMNSMGAF QEAAKLGFRY IETDVRATRD GVAVILHDRR
       61 LAPGVGLSGA VDRLDWRDVR KAQLGAGQSI PTLEDLLTAL PDMRVNIDIK AASAIEPTVN
      121 VIERCNAHNR VLIGSFSERR RRRALRLLTK RVASSAGTGA LLAWLTARPL GSRAYAWRMM
      181 RDIDCVQLPS RLGGVPVITP ARVRGFHAAG RQVHAWTVDE PDVMHTLLDM DVDGIITDRA
      241 DLLRDVLIAR GEWDGA
//