LOCUS       CAB5248011.1             606 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 pe-
            pgrs family protein pe_pgrs5 protein.
ACCESSION   LT708304-310
PROTEIN_ID  CAB5248011.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="PE_PGRS5"
                     /locus_tag="BQ2027_MB0305"
                     /note="Mb0305, PE_PGRS5, len: 606 aa. Equivalent to
                     Rv0297, len: 591 aa, from Mycobacterium tuberculosis
                     strain H37Rv, (97.5% identity in 606 aa overlap). Member
                     of the Mycobacterium tuberculosis PE family, PGRS
                     subfamily of gly-rich proteins, highly similar to others
                     e.g. Y03A_MYCTU|Q10637 from Mycobacterium tuberculosis
                     (603 aa), FASTA scores: opt: 1884, E(): 0, (53.7% identity
                     in 635 aa overlap). REMARK-M.bovis-M.tuberculosis: In
                     Mycobacterium bovis, a 45 bp in-frame insertion leads to a
                     longer product compared to its homolog in Mycobacterium
                     tuberculosis strain H37Rv (606 aa versus 591 aa). Mb0305
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
BEGIN
        1 MSFVIAQPEM IAAAAGELAS IRSAINAANA AAAAQTTGVM SAAADEVSTA VAALFSSHAQ
       61 AYQAASAQAA AFHAQVVRTL TVDAGAYASA EAANAGPNML AAVNAPAQAL LGRPLIGNGA
      121 NGAPGTGQAG GDGGLLFGNG GNGGSGAPGQ AGGAGGAAGF FGNGGNGGDG GAGANGGAGG
      181 TAGWFFGFGG NGGAGGIGVA GINGGLGGAG GDGGNAGFFG NGGNGGMGGA GAAGVNAVNP
      241 GLATPVTPAA NGGNGLNLVG VPGTAGGGAD GANGSAIGQA GGAGGDGGNA STSGGIGIAQ
      301 TGGAGGAGGA GGDGAPGGNG GNGGSVEHTG ATGSSASGGN GATGGNGGVG APGGAGGNGG
      361 HVSGGSVNTA GAGGKGGNGG TGGAGGPGGH GGSVLSGPVG DSGNGGAGGD GGAGVSATDI
      421 AGTGGRGGNG GHGGLWIGNG GDGGAGGVGG VGGAGAAGAI GGHGGDGGSV NTPIGGSEAG
      481 DGGKGGLGGD GGDGAAGGDG GAGGDGGGRG IFGQFGAGGA GGAGGVGGAG GAGGTGGGGG
      541 NGGAIFNAGT PGAAGTGGDG GVGGTGAAGG KGGAGGSGGV NGATGADGAK GLDGATGGKG
      601 NNGNPG
//