LOCUS CAB5248011.1 606 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 pe- pgrs family protein pe_pgrs5 protein. ACCESSION LT708304-310 PROTEIN_ID CAB5248011.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PE_PGRS5" /locus_tag="BQ2027_MB0305" /note="Mb0305, PE_PGRS5, len: 606 aa. Equivalent to Rv0297, len: 591 aa, from Mycobacterium tuberculosis strain H37Rv, (97.5% identity in 606 aa overlap). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, highly similar to others e.g. Y03A_MYCTU|Q10637 from Mycobacterium tuberculosis (603 aa), FASTA scores: opt: 1884, E(): 0, (53.7% identity in 635 aa overlap). REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a 45 bp in-frame insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (606 aa versus 591 aa). Mb0305 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." BEGIN 1 MSFVIAQPEM IAAAAGELAS IRSAINAANA AAAAQTTGVM SAAADEVSTA VAALFSSHAQ 61 AYQAASAQAA AFHAQVVRTL TVDAGAYASA EAANAGPNML AAVNAPAQAL LGRPLIGNGA 121 NGAPGTGQAG GDGGLLFGNG GNGGSGAPGQ AGGAGGAAGF FGNGGNGGDG GAGANGGAGG 181 TAGWFFGFGG NGGAGGIGVA GINGGLGGAG GDGGNAGFFG NGGNGGMGGA GAAGVNAVNP 241 GLATPVTPAA NGGNGLNLVG VPGTAGGGAD GANGSAIGQA GGAGGDGGNA STSGGIGIAQ 301 TGGAGGAGGA GGDGAPGGNG GNGGSVEHTG ATGSSASGGN GATGGNGGVG APGGAGGNGG 361 HVSGGSVNTA GAGGKGGNGG TGGAGGPGGH GGSVLSGPVG DSGNGGAGGD GGAGVSATDI 421 AGTGGRGGNG GHGGLWIGNG GDGGAGGVGG VGGAGAAGAI GGHGGDGGSV NTPIGGSEAG 481 DGGKGGLGGD GGDGAAGGDG GAGGDGGGRG IFGQFGAGGA GGAGGVGGAG GAGGTGGGGG 541 NGGAIFNAGT PGAAGTGGDG GVGGTGAAGG KGGAGGSGGV NGATGADGAK GLDGATGGKG 601 NNGNPG //