LOCUS CAB5247992.1 877 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PE- PGRS FAMILY PROTEIN protein. ACCESSION LT708304-291 PROTEIN_ID CAB5247992.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PE_PGRS3" /locus_tag="BQ2027_MB0286C" /note="Mb0286c, PE_PGRS3, len: 877 aa. Equivalent to Rv0278c, len: 957 aa, from Mycobacterium tuberculosis strain H37Rv, (). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, similar to many e.g. Z95890|MTCY28_25|Rv1759c from Mycobacterium tuberculosis (914 aa), FASTA scores: opt: 3849, E(): 0, (67.8% identity in 903 aa overlap). Contains PS00583 pfkB family of carbohydrate kinases signature 1. REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, 2 deletions, one of 18 bp and the other of 66 bp, and part of a 2780 bp insertion, leads to a shorter product with a different 3' end compared to its homolog in Mycobacterium tuberculosis strain H37Rv (877 aa versus 957 aa). Mb0286c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing (TPM > 20)." BEGIN 1 MSFVIAAPEV IAAAATDLAS LGSSISAANA AAAANTTALM AAGADEVSTA IAALFGAHGQ 61 AYQALSAQAQ AFHAQFVQAL TSGGGAYAAA EAAAVSPLLD PINEFFLANT GRPLIGNGAN 121 GAPGTGANGG DGGWLIGNGG AGGSGAAGVN GGAGGNGGAG GLIGNGGAGG AGGVASSGIG 181 GSGGAGGNAM LFGAGGAGGA GGGVVALTGG AGGFTNGSAL GGAGGAGGAG GLFATGGVGG 241 SGGAGSSGGA GGAGGAGGLF GAGGTGGHGG FADSSFGGVG GAGGAGGLFG AGGEGGSGGH 301 SLVAGGDGGA GGNAGMLALG AAGGAGGIGG DGGTLTAGGI GGAGGAGGNA GLLFGSGGSG 361 GAGGFGFADG GQGGPGGNAG TVFGSGGAGG NGGVGQGFAG GIGGAGGTPG LIGNGGNGGN 421 GGASAVTGGN GGIGGTGVLI GNGGNGGSGG IGAGKAGVGG VSGLLLGLDG FNAPASTSPL 481 HTLQQNVLNV VNEPFQTLTG RPLIGNGANG TPGTGADGGA GGWLFGNGGN GGSGATGTNG 541 GDGGDGGAGG IFFGTGGTGG AGGVGTTGTG GDGGAGGAAF LVGSGGNGGS GGAGLTAGGD 601 GGDGGNAGSF FGAAGTGGAG ASTKAGGTGG TGGNGGLFAN GGAGGSGGLG GDAGTGGAGG 661 NGGLFGAGGT GGAGGSLGPG AGGAGGNGGL FGAGGTGGSG GHGTPAAVPG GAGGAGGNAG 721 LFSLGASGGA GGSGGSSLTD SGGIGGVGGA GGLLFGYGGA GGAGGYSNIG AGGAGGAGGN 781 AGMLSGSGGS GGTGGASGAA KGGVGGNGGT AGVFGNGGDG GAGGFGAGTG GNGGVGGNAV 841 LIGNGGNGGN GGKAGGTPGA GGTSGLLIGE NGLNGLP //