LOCUS       CAB5247992.1             877 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PE-
            PGRS FAMILY PROTEIN protein.
ACCESSION   LT708304-291
PROTEIN_ID  CAB5247992.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="PE_PGRS3"
                     /locus_tag="BQ2027_MB0286C"
                     /note="Mb0286c, PE_PGRS3, len: 877 aa. Equivalent to
                     Rv0278c, len: 957 aa, from Mycobacterium tuberculosis
                     strain H37Rv, (). Member of the Mycobacterium tuberculosis
                     PE family, PGRS subfamily of gly-rich proteins, similar to
                     many e.g. Z95890|MTCY28_25|Rv1759c from Mycobacterium
                     tuberculosis (914 aa), FASTA scores: opt: 3849, E(): 0,
                     (67.8% identity in 903 aa overlap). Contains PS00583 pfkB
                     family of carbohydrate kinases signature 1.
                     REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, 2
                     deletions, one of 18 bp and the other of 66 bp, and part
                     of a 2780 bp insertion, leads to a shorter product with a
                     different 3' end compared to its homolog in Mycobacterium
                     tuberculosis strain H37Rv (877 aa versus 957 aa). Mb0286c
                     found to be expressed during exponential growth in
                     Sauton's minimal media by RNA-sequencing (TPM > 20)."
BEGIN
        1 MSFVIAAPEV IAAAATDLAS LGSSISAANA AAAANTTALM AAGADEVSTA IAALFGAHGQ
       61 AYQALSAQAQ AFHAQFVQAL TSGGGAYAAA EAAAVSPLLD PINEFFLANT GRPLIGNGAN
      121 GAPGTGANGG DGGWLIGNGG AGGSGAAGVN GGAGGNGGAG GLIGNGGAGG AGGVASSGIG
      181 GSGGAGGNAM LFGAGGAGGA GGGVVALTGG AGGFTNGSAL GGAGGAGGAG GLFATGGVGG
      241 SGGAGSSGGA GGAGGAGGLF GAGGTGGHGG FADSSFGGVG GAGGAGGLFG AGGEGGSGGH
      301 SLVAGGDGGA GGNAGMLALG AAGGAGGIGG DGGTLTAGGI GGAGGAGGNA GLLFGSGGSG
      361 GAGGFGFADG GQGGPGGNAG TVFGSGGAGG NGGVGQGFAG GIGGAGGTPG LIGNGGNGGN
      421 GGASAVTGGN GGIGGTGVLI GNGGNGGSGG IGAGKAGVGG VSGLLLGLDG FNAPASTSPL
      481 HTLQQNVLNV VNEPFQTLTG RPLIGNGANG TPGTGADGGA GGWLFGNGGN GGSGATGTNG
      541 GDGGDGGAGG IFFGTGGTGG AGGVGTTGTG GDGGAGGAAF LVGSGGNGGS GGAGLTAGGD
      601 GGDGGNAGSF FGAAGTGGAG ASTKAGGTGG TGGNGGLFAN GGAGGSGGLG GDAGTGGAGG
      661 NGGLFGAGGT GGAGGSLGPG AGGAGGNGGL FGAGGTGGSG GHGTPAAVPG GAGGAGGNAG
      721 LFSLGASGGA GGSGGSSLTD SGGIGGVGGA GGLLFGYGGA GGAGGYSNIG AGGAGGAGGN
      781 AGMLSGSGGS GGTGGASGAA KGGVGGNGGT AGVFGNGGDG GAGGFGAGTG GNGGVGGNAV
      841 LIGNGGNGGN GGKAGGTPGA GGTSGLLIGE NGLNGLP
//