LOCUS       CAB5247956.1             611 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            ACYL-COA DEHYDROGENASE FADE5 protein.
ACCESSION   LT708304-255
PROTEIN_ID  CAB5247956.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="fadE5"
                     /locus_tag="BQ2027_MB0250C"
                     /note="Mb0250c, fadE5, len: 611 aa. Equivalent to Rv0244c,
                     len: 611 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (99.7% identity in 611 aa overlap). Probable fadE5,
                     acyl-CoA dehydrogenase (EC 1.3.99.-), equivalent to
                     AL022486|MLCB1883_15 from Mycobacterium leprae (611 aa),
                     FASTA scores: opt: 3598, E(): 0, (89.4% identity in 611 aa
                     overlap). Also highly similar to AL0211|MTV007.14 from
                     Mycobacterium tuberculosis (609 aa), FASTA scores: opt:
                     2576, E(): 0, (64.6% identity in 611 aa overlap); and to
                     various other bacterial proteins described as putative
                     acyl-CoA dehydrogenases e.g. AE0010|AE001025_6 from
                     Archaeoglobus fulgidus (387 aa), FASTA scores: opt: 229,
                     E(): 6.8e-08, (29.8% identity in 409 aa overlap); etc.
                     Protein product from Mb0250c detected using shotgun mass
                     spectrometry and SWATH mass spectrometry. Mb0250c found to
                     be expressed during exponential growth in Sauton's minimal
                     media by RNA-sequencing (TPM > 20)."
BEGIN
        1 MSHYRSNVRD QVFNLFEVLG VDKALGHGEF SDVDVDTARD MLAEVSRLAE GPVAESFVEG
       61 DRNPPVFDPK THSVMLPESF KKSVNAMLEA GWDKVGIDEA LGGMPMPKAV VWALHEHILG
      121 ANPAVWMYAG GAGFAQILYH LGTEEQKKWA VLAAERGWGS TMVLTEPDAG SDVGAARTKA
      181 VQQADGSWHI DGVKRFITSG DSGDLFENIF HLVLARPEGA GPGTKGLSLY FVPKFLFDVE
      241 TGEPGERNGV FVTNVEHKMG LKVSATCELA FGQHGVPAKG WLVGEVHNGI AQMFEVIEQA
      301 RMMVGTKAIA TLSTGYLNAL QYAKSRVQGA DLTQMTDKTA PRVTITHHPD VRRSLMTQKA
      361 YAEGLRALYL YTATFQDAAV AEVVHGVDAK LAVRVNDLML PVVKGVGSEQ AYAKLTESLQ
      421 TLGGSGFLQD YPIEQYIRDA KIDSLYEGTT AIQAQDFFFR KIVRDKGVAL AHVSGQIQAF
      481 VDSGAGNGRL KTERALLAKA LTDVQGMAAA LTGYLMAAQQ DVTSLYKVGL GSVRFLMSVG
      541 DLIIGWLLQR QAAVAVAALD AGATGDERSF YEGKVAVASF FAKNFLPLLT STREVIETLD
      601 NDIMELDEAA F
//