LOCUS       CAB5247946.1             482 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            CONSERVED TRANSMEMBRANE PROTEIN protein.
ACCESSION   LT708304-245
PROTEIN_ID  CAB5247946.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /locus_tag="BQ2027_MB0240C"
                     /note="Mb0240c, -, len: 482 aa. Equivalent to Rv0235c,
                     len: 482 aa, from Mycobacterium tuberculosis strain H37Rv,
                     (100.0% identity in 482 aa overlap). Possible conserved
                     transmembrane protein, highly similar to
                     AL133278|CAB61913.1|SCM11_2 putative integral membrane
                     protein from Streptomyces coelicolor (470 aa), FASTA
                     scores: opt: 2116, E(): 0, (61.8% identity in 474 aa
                     overlap); and similar to hypothetical proteins from other
                     organisms e.g. Q13392|384D8_7 hypothetical protein (579
                     aa), FASTA scores: opt: 355, E(): 6.9e-17, (28.5% identity
                     in 569 aa overlap). Mb0240c found to be expressed during
                     exponential growth in Sauton's minimal media by
                     RNA-sequencing."
BEGIN
        1 MGWFSAPEYW LGRLALERGT AIIYLIAFVA AAQQFRPLIG EHGMLPVPRY LAGQSFWRTP
       61 SIFHFRYSDR VFAGVCWLGA VLSAAVVAGA ASFVPLWATM LIWLTLWVLY LSIVNVGQAW
      121 YSFGWESLLL ETGFLMIFLG NERTAPPILT LLLARWLLFR VEFGAGLIKM RGDSCWRSLT
      181 CLYYHHETQP MPGPLSWFFH HLPKPLHRIE VAGNHFAQLV VPFGLFTPQP AASIAAAIIV
      241 VTQLWLVASG NFSWLNWLTI LLACSAIDTS SAAALLPMPA QPALSAPPQW FAGLVVVFTA
      301 AVLLLSYWPA RNLLSSHQRM NMSFNPFHLV NTYGAFGSIC RTRREVVIEG TDESPITEQT
      361 VWKAYEFKGK PGDPRRLPRQ WAPYHLRLDW LMWFAAISPG YALPWMTPFL NRLLRNDPAT
      421 LKLLRHNPFP QSPPRYVRAQ LYQYRFTTVA ELRRDRAWWH RTLIGRYVPP MSLRKVASPP
      481 AD
//