LOCUS CAB5247946.1 482 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN protein. ACCESSION LT708304-245 PROTEIN_ID CAB5247946.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /locus_tag="BQ2027_MB0240C" /note="Mb0240c, -, len: 482 aa. Equivalent to Rv0235c, len: 482 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 482 aa overlap). Possible conserved transmembrane protein, highly similar to AL133278|CAB61913.1|SCM11_2 putative integral membrane protein from Streptomyces coelicolor (470 aa), FASTA scores: opt: 2116, E(): 0, (61.8% identity in 474 aa overlap); and similar to hypothetical proteins from other organisms e.g. Q13392|384D8_7 hypothetical protein (579 aa), FASTA scores: opt: 355, E(): 6.9e-17, (28.5% identity in 569 aa overlap). Mb0240c found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." BEGIN 1 MGWFSAPEYW LGRLALERGT AIIYLIAFVA AAQQFRPLIG EHGMLPVPRY LAGQSFWRTP 61 SIFHFRYSDR VFAGVCWLGA VLSAAVVAGA ASFVPLWATM LIWLTLWVLY LSIVNVGQAW 121 YSFGWESLLL ETGFLMIFLG NERTAPPILT LLLARWLLFR VEFGAGLIKM RGDSCWRSLT 181 CLYYHHETQP MPGPLSWFFH HLPKPLHRIE VAGNHFAQLV VPFGLFTPQP AASIAAAIIV 241 VTQLWLVASG NFSWLNWLTI LLACSAIDTS SAAALLPMPA QPALSAPPQW FAGLVVVFTA 301 AVLLLSYWPA RNLLSSHQRM NMSFNPFHLV NTYGAFGSIC RTRREVVIEG TDESPITEQT 361 VWKAYEFKGK PGDPRRLPRQ WAPYHLRLDW LMWFAAISPG YALPWMTPFL NRLLRNDPAT 421 LKLLRHNPFP QSPPRYVRAQ LYQYRFTTVA ELRRDRAWWH RTLIGRYVPP MSLRKVASPP 481 AD //