LOCUS CAB5247923.1 606 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 probable iron-regulated phosphoenolpyruvate carboxykinase [gtp] pcka (phosphoenolpyruvate carboxylase) (pepck)(pep carboxykinase) protein. ACCESSION LT708304-222 PROTEIN_ID CAB5247923.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="pckA" /locus_tag="BQ2027_MB0217" /standard_name="pckG; pck1" /note="Mb0217, pckA, len: 606 aa. Equivalent to Rv0211, len: 606 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 606 aa overlap). Probable pckA (alternate gene names: pckG and pck1), phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32), equivalent to Z95398|MLCL622_21 PROBABLE PHOSPHOENOLPYRUVATE CARBOXYKINASE from Mycobacterium leprae (609 aa), FASTA score: (86.1% identity in 605 aa overlap). Also highly similar to others e.g. PPCK_NEOFR|P22130 phosphoenolpyruvate carboxykinase [GTP] (608 aa), FASTA scores: opt: 2287, E(): 0, (55.9% identity in 598 aa overlap). Contains PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. BELONGS TO THE PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP] FAMILY. Protein product from Mb0217 detected using shotgun mass spectrometry and SWATH mass spectrometry. Mb0217 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing." /experiment="experimental evidence, no additional details recorded" BEGIN 1 MTSATIPGLD TAPTNHQGLL SWVEEVAELT QPDRVVFTDG SEEEFQRLCD QLVEAGTFIR 61 LNPEKHKNSY LALSDPSDVA RVESRTYICS AKEIDAGPTN NWMDPGEMRS IMKDLYRGCM 121 RGRTMYVVPF CMGPLGAEDP KLGVEITDSE YVVVSMRTMT RMGKAALEKM GDDGFFVKAL 181 HSVGAPLEPG QKDVAWPCSE TKYITHFPET REIWSYGSGY GGNALLGKKC YSLRIASAMA 241 HDEGWLAEHM LILKLISPEN KAYYFAAAFP SACGKTNLAM LQPTIPGWRA ETLGDDIAWM 301 RFGKDGRLYA VNPEFGFFGV APGTNWKSNP NAMRTIAAGN TVFTNVALTD DGDVWWEGLE 361 GDPQHLIDWK GNDWYFRETE TNAAHPNSRY CTPMSQCPIL APEWDDPQGV PISGILFGGR 421 RKTTVPLVTE ARDWQHGVFI GATLGSEQTA AAEGKVGNVR RDPMAMLPFL GYNVGDYFQH 481 WINLGKHADE SKLPKVFFVN WFRRGDDGRF LWPGFGENSR VLKWIVDRIE HKAGGATTPI 541 GTVPAVEDLD LDGLDVDAAD VAAALAVDAD EWRQELPLIE EWLQFVGEKL PTGVKDEFDA 601 LKERLG //