LOCUS CAB5247831.1 538 aa PRT BCT 25-MAY-2020 DEFINITION Mycobacterium tuberculosis variant bovis AF2122/97 pe- pgrs family protein pe_pgrs2 protein. ACCESSION LT708304-130 PROTEIN_ID CAB5247831.1 SOURCE Mycobacterium tuberculosis variant bovis AF2122/97 ORGANISM Mycobacterium tuberculosis variant bovis AF2122/97 Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Malone K.M. JOURNAL Submitted (06-DEC-2016) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine, University College Dublin, D4, Ireland REFERENCE 2 AUTHORS Malone M K., Farrell D., Malone K. JOURNAL Submitted (15-APR-2020) to the INSDC. School of Veterinary Medicine, Tuberculosis Molecular Microbiology Research Group, University College Dublin, Tuberculosis Molecular Microbiology Research Group, School of Veterinary Medicine,, University College Dublin, D4, Ireland FEATURES Qualifiers source /organism="Mycobacterium tuberculosis variant bovis AF2122/97" /chromosome="Mycobacterium_bovis_AF212297" /isolate="AF2122/97" /mol_type="genomic DNA" /isolation_source="Mycobacterium bovis subsp. bovis strain AF2122/97. This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection." /db_xref="taxon:233413" protein /transl_table=11 /gene="PE_PGRS2" /locus_tag="BQ2027_MB0129" /note="Mb0129, PE_PGRS2, len: 538 aa. Similar to Rv0124, len: 487 aa, from Mycobacterium tuberculosis strain H37Rv, (87.4% identity in 547 aa overlap). Member of the Mycobacterium tuberculosis PE family, PGRS subfamily of gly-rich proteins, highly similar to many e.g. Y0DP_MYCTU|Q50615 from Mycobacterium tuberculosis (498 aa), FASTA scores: opt: 1730, E(): 0, (60.7% identity in 504 aa overlap). REMARK-M.bovis-M.tuberculosis: In Mycobacterium bovis, a 180 bp insertion leads to a longer product in the 3' direction compared to its homolog in Mycobacterium tuberculosis strain H37Rv (538 aa versus 487 aa)." BEGIN 1 MSFVSVAPEI VVAAATDLAG IGSAISAANA AAAAPTTAVL AAGADEVSAA IAALFSGHAQ 61 AYQALSAQAA AFHQQFVQTL AGGAGAYAAA EAQVEQQLLA AINAPTQALL GRPLIGNGAD 121 GAPGTGQAGG AGGILYGNGG NGGSGAAGQA GGAGGPAGLI GHGGSGGAGG HGGWLWGNGG 181 VGGSGGAGVG AGVAGGHGGA GGAAGLWGAG GGGGNGGNGA DANIVSGGDG GLGGAGGGGG 241 WLYGDGGAGG HGGQGAIGLG GGAGGDGGQG GAGRGLWGTG GAGGHGGQGG GTGGPPLPGQ 301 AGMGAAGGAG GLIGNGGAGG DGGVGASGGV AGVGGAGGNA MLIGHGGAGG AGGDSSFANG 361 AAGGAGGAGG HLFGNGGSGG HGGAVTAGNT GIGGAGGVGG DARLIGHGGA GGAGGDRAGA 421 LVGRDGGPGG NGGAGGQLYG NGGDGGPGGQ GGQAFGANNI GGTGGAGGNG GPAILSGNGG 481 NGGAGGAGGA GGAGGGAGGV GGAGGAPGTG GTLQAAVSGL VTALFGAPGQ PGDTGQPG //