LOCUS CAB13898.2 1084 aa PRT BCT 08-FEB-2018 DEFINITION Bacillus subtilis subsp. subtilis str. 168 SPbeta phage ribonucleoside reductase alpha (large) subunit protein. ACCESSION AL009126-2116 PROTEIN_ID CAB13898.2 SOURCE Bacillus subtilis subsp. subtilis str. 168 ORGANISM Bacillus subtilis subsp. subtilis str. 168 Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus. REFERENCE 1 (bases 1 to 4215606) AUTHORS Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.K., Codani J.J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Dusterhoft A., Ehrlich S.D., Emmerson P.T., Entian K.D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.F., Itaya M., Jones L., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.F., Zumstein E., Yoshikawa H., Danchin A. TITLE The complete genome sequence of the gram-positive bacterium Bacillus subtilis JOURNAL Nature 390(6657), 249-256(1997). PUBMED 9384377 REFERENCE 2 (bases 1 to 4215606) AUTHORS Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C., Danchin A. TITLE From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later JOURNAL Microbiology (Reading, Engl.) 155(Pt 6), 1758-1775(2009). PUBMED 19383706 REFERENCE 3 (bases 1 to 4215606) AUTHORS Belda E., Sekowska A., Le Fevre F., Mornico D., Morgat A., Ouzounis C., Vallenet D., Medigue C., Danchin A. TITLE An updated metabolic view of the Bacillus subtilis 168 genome JOURNAL Microbiology (Reading, Engl.) 159(Pt 4), 757-770(2013). PUBMED 23429746 REFERENCE 4 (bases 1 to 4215606) AUTHORS Kunst F., Ogasawara N., Yoshikawa H., Danchin A. JOURNAL Submitted (18-NOV-1997) to the INSDC. I. Moszer, A. Danchin, Genetique des Genomes Bacteriens, Institut Pasteur, 28 rue du Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail: moszer@pasteur.fr, antoine.danchin@normalesup.org Phone: +33 (0)1 45 68 84 41, Fax: +33 (0)1 45 68 89 48 REFERENCE 5 (bases 1 to 4215606) AUTHORS Genoscope - C.E.A. CONSRTM Institut Pasteur and Genoscope JOURNAL Submitted (29-JAN-2009) to the INSDC. Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr) REFERENCE 6 (bases 1 to 4215606) AUTHORS Genoscope - C.E.A. CONSRTM AMAbiotics and Genoscope JOURNAL Submitted (24-JAN-2013) to the INSDC. A. Danchin, AMAbiotics, Bldg G1, 2, rue Gaston Cremieux, 91000 EVRY antoine.danchin@normalesup.org Bldg G1 Genoscope / CEA (Commissariat a l'energie atomique et aux energies alternatives): BP 191 91006 EVRY cedex - FRANCE (E-mail: seqref@genoscope.cns.fr - Web: www.genoscope.cns.fr) REFERENCE 8 AUTHORS Borriss R., Danchin A., Harwood C.R., Medigue C., Rocha E.P.C., Sekowska A., Vallenet D. TITLE Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement JOURNAL Microb Biotechnol 11(1), 3-17(2018). PUBMED 29280348 COMMENT On or before Mar 17, 2009 this sequence version replaced gi:32468687, gi:32468690, gi:32468695, gi:32468704, gi:32468715, gi:32468723, gi:32468738, gi:32468743, gi:32468745, gi:32468758, gi:32468767, gi:32468778, gi:32468787, gi:32468796, gi:32468802, gi:32468809, gi:32468813, gi:32468825, gi:32468830, gi:32468833, gi:32468840, gi:38680335. Annotation results relative to BLAST similarities, COG assignations, enzymatic function prediction (PRIAM software), TMHMM and SignalP predictions, and synteny conservation (Syntonizer software) are available in the MicroScope annotation platform http://www.genoscope.cns.fr/agc/microscope. The large cluster comprising the i, h and g rDNA regions could not be properly resolved, we therefore incorporated the original sequence of rRNAihg in the final assembly. FEATURES Qualifiers source /organism="Bacillus subtilis subsp. subtilis str. 168" /sub_species="subtilis" /strain="168" /mol_type="genomic DNA" /db_xref="taxon:224308" protein /transl_table=11 /gene="nrdEB" /locus_tag="BSU_20060" /old_locus_tag="BSU20060" /function="8.1: DNA replication, recombination, and repair" /function="17.2: Prophage functions" /EC_number="1.17.4.1" /note="Evidence 2b: Function from indirect experimental evidences (e.g. phenotypes); PubMedId: 8969495, 9465078, 16621400; Product type e: enzyme" /db_xref="EnsemblGenomes-Gn:BSU20060" /db_xref="EnsemblGenomes-Tr:CAB13898" /db_xref="GOA:O31875" /db_xref="InterPro:IPR000788" /db_xref="InterPro:IPR003586" /db_xref="InterPro:IPR003587" /db_xref="InterPro:IPR004042" /db_xref="InterPro:IPR004860" /db_xref="InterPro:IPR006141" /db_xref="InterPro:IPR006142" /db_xref="InterPro:IPR008926" /db_xref="InterPro:IPR013509" /db_xref="InterPro:IPR013554" /db_xref="InterPro:IPR027434" /db_xref="InterPro:IPR030934" /db_xref="InterPro:IPR036844" /db_xref="InterPro:IPR039718" /db_xref="SubtiList:BG13723" /db_xref="UniProtKB/Swiss-Prot:O31875" /inference="ab initio prediction:AMIGene:2.0" intron_pos 241:0 (1/1) BEGIN 1 MTNTIPNWIK LNNEIMIQKD GKYQFEKDKE AVHSYFVDYI NQNTVFFHDL KEKLDYLIKN 61 DYYEEEFLSK YTFEQIKSIY KIAYSYKFRF PSFMSAFKFY NDYALKTNDK TKILERYEDR 121 VSIVALYCAD GDYEKAVEEV HTMMKQEYQP ATPTFLNAGR KRRGEMVSCF LLEVGDSLND 181 ISRAIDISMQ LSKLGGGVAL NLNKLRAKGE AIKDVENATK GVVGVMKLLD NAFRYADQMG 241 QRQGSGAVYL SVFHPDITDF LDTKKISADE DVRVKTLSIG VVVPDKFIEL AREDKDYYMF 301 YPHSVYKEYG QYLDELDINE MYDELVENPR VRKAKGNARK LLEQLAILRS ESGYPYIMFA 361 DNVNKVHPNE HISKVKFSNL CVTGETLLLT ENGYEKAADL YKKQNDLKVV IDNRTKDFAV 421 GSKGTTIVDA IPMQLTKKDA EIFKVKTKQG YEIRATEWHK FYVKRDGEIQ KLQLNQLKTG 481 DKLLVQSAEG AYGKIHEPDL AYIMGIIAGD GTITEKTAKI YLYDNKKVLE QKVTDAVHRI 541 IQKHKVDRAY KHNTSLLPTF NMANPEKQDL LYMNSTVLFD ILKKFGMNKE TKTRVPEFIF 601 QANKETQAAY LSGLFQTDGC VNANHKAKAL TIELTSIHYE SLQDVQKLLL NMGVYTTIYS 661 NNKRSQELLP DGKGGSKLYN VKPTHKISIQ DRNSRELFMS IVEMKEYDVY KFNLLTETLQ 721 PKSRKPKHDF TAEIISIEED GVEDVYDTTQ EDYHSLIFNG IVTGNCSEVL QSSQVSVYTD 781 YDKEDEIGLD ISCNLGSMNI VNVMSNQSIA STVRIAIDSL TTVTRKTNIV NAPAVARANT 841 LMRSIGLGQM NLHGFLAQNN IAYESEEAKD FANTYFMMVN FYSLQRSMEI ARETGETYYK 901 FDGSTYKSGE YFEKYVTNDY SPQYEKVKKL FGDQHIPNIQ DWMKLKEDVM KYGLYHSYRQ 961 AIAPTGSISY VQSSTAGVMP IMERIEERTY GNSKTYYPMP GLSAQNWFFY KEAYDMDMFK 1021 VVDLIATIQQ HVDQGISFTL FLKDTMTTRD LNRIDLYAHH RGIKTLYYAR TKDTTQEGCL 1081 SCVV //