LOCUS       CAB03158.2               667 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Acyl-coenzyme A oxidase protein.
ACCESSION   BX284606-3781
PROTEIN_ID  CAB03158.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="acox-1.6"
                     /locus_tag="CELE_F59F4.1"
                     /standard_name="F59F4.1"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00010336"
                     /db_xref="EnsemblGenomes-Tr:F59F4.1"
                     /db_xref="GOA:Q93839"
                     /db_xref="InterPro:IPR002655"
                     /db_xref="InterPro:IPR006091"
                     /db_xref="InterPro:IPR009100"
                     /db_xref="InterPro:IPR012258"
                     /db_xref="InterPro:IPR029320"
                     /db_xref="InterPro:IPR036250"
                     /db_xref="InterPro:IPR037069"
                     /db_xref="UniProtKB/TrEMBL:Q93839"
                     /db_xref="WormBase:WBGene00010336"
     intron_pos      40:0 (1/7)
     intron_pos      100:2 (2/7)
     intron_pos      123:1 (3/7)
     intron_pos      184:2 (4/7)
     intron_pos      325:2 (5/7)
     intron_pos      443:2 (6/7)
     intron_pos      596:2 (7/7)
BEGIN
        1 MSRWIQPGDN VDITNERKKA TFDTERMSAW IHGGTEVMKR RREILDFVKS VDDFKDPVPT
       61 EFMSREERIL NNARKVVAMT NNTDQIDGSD FFGEGMYYQA LTMGRDLHAM SLHYVMFIPT
      121 LQGQTDDDQL DEWLTKAISR AVVGTYAQTE LGHGTNLSKL ETTATYDPAT EEFVMNSPTI
      181 TAAKWWPGGL GKSSNYAVVV AQLYTKGECK GPHPFIVQLR DEDTHYPLKG IRLGDIGPKL
      241 GINGNDNGFL LFDKVRIPRK ALLMRYAKVN PDGTYIAPAH SKLGYGTMVF VRSIMIKDQS
      301 TQLAAAATIA TRYAAVRRQG EITPGKGEVQ IIDYQTQQFR VFPQLARAFA FMAAATEIRD
      361 LYMTVTEQLT HGNTELLAEL HVLSSGLKSL VSWDTAQGIE QCRLACGGHG YSQASGFPEI
      421 YGYAVGGCTY EGENIVMLLQ VARFLMKAAE GVRKGTANLA DIGAYIGKPG RKTSRLTTHH
      481 HYTDADIVED LEHVARKQVF RAYDRLKKAQ EHLRPEDAWN SVSVELAKAS RWHVRLYLVK
      541 NLLHKVSIAP QDLKIVLFDV ARLYAYDIIT SSIGAFLEDG YMSSNQMNEV KEGIYKCLSN
      601 MRPNAVGLVD CWDYDDKELK SVLGRRDGNV YPALLQWAQN SQLNRSEVLP AYEKYLGPMM
      661 KDARSKL
//