LOCUS CAB02662.3 2022 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Serine/threonine-protein kinase TOR protein.
ACCESSION BX284606-2335
PROTEIN_ID CAB02662.3
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="F21G4.6"
/locus_tag="CELE_F21G4.6"
/standard_name="F21G4.6"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00009027"
/db_xref="EnsemblGenomes-Tr:F21G4.6"
/db_xref="InterPro:IPR028426"
/db_xref="UniProtKB/TrEMBL:Q93547"
/db_xref="WormBase:WBGene00009027"
intron_pos 49:0 (1/27)
intron_pos 85:0 (2/27)
intron_pos 130:2 (3/27)
intron_pos 183:0 (4/27)
intron_pos 221:0 (5/27)
intron_pos 266:0 (6/27)
intron_pos 323:0 (7/27)
intron_pos 425:1 (8/27)
intron_pos 465:1 (9/27)
intron_pos 558:1 (10/27)
intron_pos 631:0 (11/27)
intron_pos 746:0 (12/27)
intron_pos 791:0 (13/27)
intron_pos 948:0 (14/27)
intron_pos 989:1 (15/27)
intron_pos 1041:2 (16/27)
intron_pos 1131:2 (17/27)
intron_pos 1236:1 (18/27)
intron_pos 1273:0 (19/27)
intron_pos 1400:1 (20/27)
intron_pos 1580:0 (21/27)
intron_pos 1616:0 (22/27)
intron_pos 1695:1 (23/27)
intron_pos 1793:2 (24/27)
intron_pos 1868:1 (25/27)
intron_pos 1919:2 (26/27)
intron_pos 1977:0 (27/27)
BEGIN
1 MTSTVLAQIT DELSTNVSLD RELNLLKSAH KIIDKNLKVN VLTDRNDTYY RYVHRLMNLT
61 FISLEKNNAD IRLAAEAYYE HILKAYECYG FPETSLKILA MSIEKMNGAR QATKMIKYLV
121 YYLDILPKQH APEKSGRTFY QEVVKNFILK SLNINQTICH QALEKWCGKL ISSVVWQNAD
181 LKEITEKALQ KLWSTRGHAS RTMAAVIGAV IEESKEMFRV MFNTHLDKVI ETFVSNQVVP
241 VGTISMIRKS IHIYISGISV DSLKGLIEML LLMIRDSSNE VAYDAFATLE ELMKVEIPQM
301 DGFVPGNFLK LKYGESISKP EEHVEDVEFV DPLVNADLYE QLQETKPPPK IDLLLEDFEK
361 MSLNANRSVT NYVVAFLGKT FLLTGSEKLL KTDRQSKDSM KILALRVLNV ICARTSIENY
421 EVRFGDKNQL MIDVICYSTS TDDQLSQQAI KFMFLVLQRG TEIYNGLDLF KSVKKFRYLL
481 DSVSVEHVLH LKNQQLLEYL EIMAFRSLYS THYDFSLAEI TSACAFMSVM RDWIQVNNIK
541 ENKHLEVMER FQNCLKNCVI DCWDSPRFIN TISTMLNYHS SETACEDQYP PSLPLRVDFP
601 HVHRTSSKAN RFKQIVYDDW RTTLLCEARM PTYVKMTAIL RESVNSPEFS HEKVPKLSRM
661 HWNSDTLPAV LQVMTVSLSD SHSKEDCYHG FHVGMSVLNW VYRNVFIVRG AAETKEFPFL
721 QHSRTEMDDT LGNRTEFRAT LDAYYKTVQS SADEKLEQLL TPTINLMLAA MAHDFKTSTE
781 NILEIIVYIT VLFTLSPISA LKLLNVLLRC LLDPKLIESL TSGRVFYFAS SNTNNFETND
841 EFLIEALKCD GDKYFNRWGD DMEVEKIKMG AMKEEILEQL EPLITQSLKC FRYRGKNEKK
901 QVLQIMICLM NHKLKLSDAD PTECLMKFAV STFARPEECA HSELFDTLMH FLATATRFQK
961 DESYQKPMIA ATMLMKSIEK LSNPGIVNAM KAVSFALFNG RYEFTDIEEF LHTSHSTWKL
1021 CMQVAPTETL YTLSLLLEKN EFGMKNQKLF WSVLREWTPH DSLKVEVPFS AIALPVSLIT
1081 NYLTSDKVNI FEIINQWLDD PVPENTLKEC TIIVALYFTL NNGDRAIDWK RYFEHCFSKF
1141 NNTKATHLLS KYADSSLLPN RVEESDLDEE LTGNDSVDID NLLEKHHCGS IQDLCHSIIC
1201 SGETSVLDFL NLIEREYPND DSIWGFLLAE FRRLDDDLEH RLDITFRLQD LVDALSERFN
1261 SNMFLKLLGN TNLAGIHLNN LSIPKIKLMF DQVSFDYTED GYVLRGIRNL LVSPRMLHFI
1321 SEDELETAQM FLNLAEKVAG IMTTDALIAT YSQYRIDFQV KCDMDEAKVK EIKKFALSMF
1381 AFCQEAHLRH SKRFSKTLSA CFRHPILNSM FNIPLVAMKC FNWVPVVEIL RKPTITCLPP
1441 TGHVCDVMVL EDMKRRLSKV GLVTNAQFEV LFTTMQAVIA HTVIGPEKMH HDEKDVLERE
1501 ARSCNALQLY IATILTSLKY PNGGDPSSGF VLKSPYISEL FLQSTEFAHL CNLKSVWKCE
1561 PRTAFTTPLE RHDQKSWTHC DGKTNLYGIC QTPLFSLWQL CGMMPIEFRQ HANYHRIDHS
1621 ASNYFLTSAT NIDTISNVKQ LMNIFEYWYS QGIGELGDTL LHSILHTILY LSDFFDDPDL
1681 HKAVLRTTSI IYRHQYDQNS VLSSFVHAMF FKSIAVLGAD VHGTEFKPGE PESIALKLVS
1741 SGLSNDIKTV RIYTLAGVLY LVQSDSYESF ISSIDILSAY LEKYLKKLAN GSGRVESDES
1801 QFALALIIKL METPMRLKQD KKTILKLLLA SMRVRRERFI IELIAEGIEQ LLCRSNEFNN
1861 EVINFVLVGV DSGDATPFPA DNEYYCRAVY RILMVAATRE KVANDEVSMT RIYNALQIIG
1921 FDMLSRGETA PAISRTLPFF SICVNGVETT ISKYIERFVI NGNKKDRRFV STLINQIVET
1981 AATSKKWSVE LKLYRERLKS KSVANADDNQ WLLNILCNKI VE
//