LOCUS CAB01755.2 772 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Protein kinase domain-containing protein protein. ACCESSION BX284606-2759 PROTEIN_ID CAB01755.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="hpo-34" /locus_tag="CELE_F29G6.3" /standard_name="F29G6.3a" /note="Partially confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00009259" /db_xref="EnsemblGenomes-Tr:F29G6.3a.1" /db_xref="EnsemblGenomes-Tr:F29G6.3a.2" /db_xref="GOA:Q93637" /db_xref="UniProtKB/TrEMBL:Q93637" /db_xref="WormBase:WBGene00009259" intron_pos 10:1 (1/17) intron_pos 44:0 (2/17) intron_pos 62:0 (3/17) intron_pos 89:0 (4/17) intron_pos 111:0 (5/17) intron_pos 144:2 (6/17) intron_pos 184:0 (7/17) intron_pos 219:0 (8/17) intron_pos 253:0 (9/17) intron_pos 289:0 (10/17) intron_pos 479:1 (11/17) intron_pos 530:0 (12/17) intron_pos 576:0 (13/17) intron_pos 595:1 (14/17) intron_pos 686:0 (15/17) intron_pos 722:0 (16/17) intron_pos 738:0 (17/17) BEGIN 1 MMETRNASDS LMDQVFSAVT LPAVGQTTTI MEHHQESHTV FHQESHHVES HHEHMEFSSS 61 GVIVGNVVGH DAVIQRRPTV DTEDQRSEVS AMSKATSVSV HSSVSQKSAQ HYDLPPIPQY 121 DMPPIVVGEA VVGKAPSVAS SRSGSHHSVA SHHSHHSQHS HHSALTHDSE STISEGTLVN 181 EPIVVGAHVA SEAPTPLAVG QSFEHDAVIE QFKNLHGRDQ SVVSSIVPAS VHIQSDSEDS 241 IAPSKLTHSI AVGGVVDSHN GVNVLHRSHE VEFVDFAAPA YYQPPSVVGA FDAHSEDSFG 301 FEKVEYVDTH EDHHHKLEEQ VPQVVHEHVI EQHYEPYQIV HENHNVLSVD FGEDQHSITH 361 HDHDHHHHHH ESHVTHTFTS NVKQSRSNTA STYQSRQMLA HNVGPKITEE LRPAAVLEEE 421 EVEVRPPVMA YVAPIPVKPP RTHEESHIYN AYETEIHQQK DIVKSTTVVL EDVRSGSEGV 481 SSLRRKFEHG APPPLSPVFE MKKHEHHKHL DQHHHHKHQD VVVEQTQFQK VSEHVQLGGS 541 RKSTIQSGHH HHHHHDHENR NDVPSRPSSV ANYVKHQPHS RTSTVSTVRG APVQRVNPTV 601 QQHVIYNPYG DHQSVRVVKN VREFVNVFGA THVVPPPTPL AGVPRLSQRS PISHETFQPH 661 DECNSVKSSR KNTLVSVGKG IQINDAPRKS TCSSVASSRS SSVSTVSAPI LVGGNIAVPT 721 PRSRNATLTQ ENVHEHDQYD DLIHVADMRK LFENYGPAHL PEYASNPSAY IH //