LOCUS       CAB01744.2               641 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans TBC1 domain family member 23 protein.
ACCESSION   BX284606-3585
PROTEIN_ID  CAB01744.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="tbc-1"
                     /locus_tag="CELE_F20D1.2"
                     /standard_name="F20D1.2"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00008974"
                     /db_xref="EnsemblGenomes-Tr:F20D1.2"
                     /db_xref="GOA:Q93534"
                     /db_xref="InterPro:IPR000195"
                     /db_xref="InterPro:IPR001763"
                     /db_xref="InterPro:IPR035969"
                     /db_xref="InterPro:IPR036873"
                     /db_xref="InterPro:IPR039755"
                     /db_xref="UniProtKB/TrEMBL:Q93534"
                     /db_xref="WormBase:WBGene00008974"
     intron_pos      19:2 (1/12)
     intron_pos      45:0 (2/12)
     intron_pos      115:0 (3/12)
     intron_pos      167:2 (4/12)
     intron_pos      209:0 (5/12)
     intron_pos      237:2 (6/12)
     intron_pos      315:0 (7/12)
     intron_pos      349:0 (8/12)
     intron_pos      414:1 (9/12)
     intron_pos      449:0 (10/12)
     intron_pos      527:0 (11/12)
     intron_pos      615:2 (12/12)
BEGIN
        1 MGETGPTNNT SFSSLDDNWE TDVNVLSSEL GDLDTEGNDK SDWMRLLGVS MKPNPLDDWD
       61 QLYNLNNQCA LRNDCRKLAN GLKNKRSVPE LESFLTLYCK KRGMDYIKDI GWLTILEKIL
      121 LLNVPAAHEF NVFFAFTTKY IPKDTRPDAQ IFDLFRLLLQ YHDPQISNHL ESLHCSPSMY
      181 TKNWFATLFS SSMSTESCHE LWKLYIEQGD PFLVFHLAIV FLINAKDEIL QVKRDEKEKA
      241 VQILENMAAQ LSVEDVPDFF QLALHYSDKT PECIRKDFHY IIFGANFDEE VKEIQMNKML
      301 CLPIPAIDLT SHDEISSGSV NFFIVDTRSN TDFDSGHFVS SFNLDCVAIV DEPEKFEIAL
      361 NSLECYKTSR RDEDHYLILG YGSDEEDNYM NMLIAMFIQK GKLHVSFVQG GYKKLHDCIG
      421 QHNRWELIAM HSEDRCELCS SEKASPKWGF FSKMKSAVSN TSSRMKERVE AVVFPIGEEK
      481 KLDDKHADSK QRHGKRYRQQ SVFTIDENSD DEMAAGAAVD ENPKEEILLS KEFTETFECQ
      541 EVFRDGSING HIALTRTHIY VLHDVPGKQG YVTTEARHAL STVVAVTSRR SVPEMLTFKL
      601 GYEMNGSSKI TAVHKLYVPK AGECAKAVKL AIYALRPLPD A
//