LOCUS CAB01738.2 793 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Dystrophin-like protein 1 protein. ACCESSION BX284606-3368 PROTEIN_ID CAB01738.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="dyc-1" /locus_tag="CELE_C33G3.1" /standard_name="C33G3.1a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00001116" /db_xref="WormBase:WBGene00001116" intron_pos 58:0 (1/12) intron_pos 73:0 (2/12) intron_pos 95:1 (3/12) intron_pos 144:0 (4/12) intron_pos 241:0 (5/12) intron_pos 286:0 (6/12) intron_pos 337:0 (7/12) intron_pos 420:0 (8/12) intron_pos 585:2 (9/12) intron_pos 659:0 (10/12) intron_pos 691:0 (11/12) intron_pos 757:2 (12/12) BEGIN 1 MIRFDPDESS EMSEEKRFYY LRLMAKPGGK PIKTKFVTWS RDEDVASASN ISDQQLESQA 61 MRVVRTIGQA FEVCHKVAQD QMQEKHEDEA AKSKISMQSE DEAGPNALDV IEERGGREED 121 SRSSSPMEAP PVGGPLYGKR LSLFQPRKPS TTSSSGGTAI DTTAIPENVL EIPNTSHPIL 181 QPKAPELVPQ LQPQTALPYQ QKPQSLLNIQ QQQFNTLPSQ MPSTQTLPSL SENPGQSHIP 241 RMMTMPPNMP YPTATLPHPR TWAPQIPSYP NSMQSLEQNV PMYYPQMPGM LPSSSSLPFG 301 LSSPVMVSPY ATLQLNMQSQ QLDQPDHSGS QITMDQYNQQ LMRSQLDQAQ QSVQVAGCQV 361 QLLRDQLTSE TTARLEAQSR THQLLSANRD LLEQVQNLVS RLQMLETKIT SEIHHSSSQP 421 PQHQPIYQPS TSTPLNPKMP LSIDHNDPRI PGNSSIRLNY PYQVQPLADL RAGSLPPVKE 481 SKERRKDEGT RTEPESNAED TTDYSSSDQY ERTSNVMKPS HFNILMSNPL VDINVPSGAA 541 MSSRMEQFDM GDTPGTSSTP PKKEKKPSSG ILRGENFSRM SFNPKLGREK EREQQQLMFE 601 DTLEDDSPRS IPPSPPSKAR NTTIDSLFKP QDDPPTIADR EPQQLPPQPS QQNQKKNTAV 661 NLLMPTMPAS SSLVTAMYPP MRQPAVPVNK IQPKVDVFRK KTLKTLSMDI AEEPEPSEMD 721 PNRNNLPSST NSSMKRRGFL PPPNTDVEIK EIEDYINRNV DRSKLPETSL LTRLTRQAQG 781 DNSLGNLPNG YPQ //