LOCUS CAA94142.2 1111 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Nuclear migration and anchoring protein unc-84 protein. ACCESSION BX284606-3249 PROTEIN_ID CAA94142.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="unc-84" /locus_tag="CELE_F54B11.3" /standard_name="F54B11.3a" /note="Confirmed by transcript evidence" /db_xref="WormBase:WBGene00006816" intron_pos 66:2 (1/9) intron_pos 160:1 (2/9) intron_pos 436:2 (3/9) intron_pos 584:1 (4/9) intron_pos 672:1 (5/9) intron_pos 724:1 (6/9) intron_pos 877:0 (7/9) intron_pos 984:0 (8/9) intron_pos 1075:0 (9/9) BEGIN 1 MAPATEADNN FDTHEWKSEF ASTRSGRNSP NIFAKVRRKL LLTPPVRNAR SPRLTEEELD 61 ALTGDLPYAT NYTYAYSKIY DPSLPDHWEV PNLGGTTSGS LSEQEHWSAA SLSRQLLYIL 121 RFPVYLVLHV ITYILEAFYH VIKITSFTIW DYLLYLVKLA KTRYYAYQDH RRRTALIRNR 181 QEPFSTKAAR SIRRFFEILV YVVLTPYRML TRSNNGVEQY QYRSIKDQLE NERASRMTTR 241 SQTLERSRKF DGLSKSPARR AAPAFVKTST ITRITAKVFS SSPFGEGTSE NITPTVVTTR 301 TVKQRSVTPR FRQTRATREA ITRALDTPEL EIDTPLSTYG LRSRGLSHLN TPEPTFDIGH 361 AAATSTPLFP QETYNYQYEE ATGNKIKTAF TWLGYLILFP FFAARHVWYT FYDYGKSAYM 421 KLTNYQQAPM ETIHVRDINE PAPSSSDVHD AVGVSWRIRI ADFLSSFVAT IVEAHQVVFA 481 MFKGGIVETV SYFGGLFAGL TDKKSSKFSW CQILGLLLAL LFAIFLLGFL TSDNTAIRVK 541 EITKDKNASK KSEGSLPAVP IWISAANHVK HYTWMVKEFV VDIAFDTYNY GKSTIGRLGT 601 TPRYAWDLIA SGCGAVGNGL KSVLSSSFRF IDFCAGKLFY YGSDGFLSAN KSIGTFFNGC 661 YETLYNGCTA IVGHTKSFIY NASNAVYNFF STIFAGLLNF STSSQNSILS LLKSFGTGIT 721 NIFYNFIYAP IAGVFNFAGD NYMYFFNEVA AVFGKVYNSV VSVLKTVINW ILFLIAYPFS 781 LCTRAWIRIS QYAPEDVVQV IPIPQAITPT PDVERIVEEP LRKVTDVEDE ELVIIPAPAP 841 KPIPVPAPTP APVIIHQTNV VETVDKDAII KEVTEKLRAE LSAQFQQELS AKFEQNYNTI 901 IEQLKMENTN IQYDKNHLEA IIRQMIYEYD TDKTGKVDYA LESSGGAVVS TRCSETYKSY 961 TRLEKFWDIP IYYFHYSPRV VIQRNSKSLF PGECWCFKES RGYIAVELSH FIDVSSISYE 1021 HIGSEVAPEG NRSSAPKGVL VWAYKQIDDL NSRVLIGDYT YDLDGPPLQF FLAKHKPDFP 1081 VKFVELEVTS NYGAPFTCLY RLRVHGKVVQ V //