LOCUS CAA94130.2 635 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Trehalase protein. ACCESSION BX284606-3225 PROTEIN_ID CAA94130.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="tre-4" /locus_tag="CELE_F15A2.2" /standard_name="F15A2.2" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00006610" /db_xref="GOA:G5EDP3" /db_xref="InterPro:IPR001661" /db_xref="InterPro:IPR008928" /db_xref="InterPro:IPR012341" /db_xref="InterPro:IPR018232" /db_xref="UniProtKB/TrEMBL:G5EDP3" /db_xref="WormBase:WBGene00006610" intron_pos 32:0 (1/10) intron_pos 93:2 (2/10) intron_pos 141:2 (3/10) intron_pos 233:2 (4/10) intron_pos 290:0 (5/10) intron_pos 341:1 (6/10) intron_pos 377:2 (7/10) intron_pos 416:2 (8/10) intron_pos 495:0 (9/10) intron_pos 543:0 (10/10) BEGIN 1 MRWTPQLLIS VLIGYVQARL EISELRFKDI LSSHYIFKPL EVPCNESLCT GPLSEIYCHG 61 PILTNSWQFG LQKTCPGDKL KVTAKEVLAN FNKLPWPLKK EVFQQFCEEH FEQVNYLEVV 121 NLTDYEVQPK FLNEIGNLSH RKLAAEMHER WERLARQFTS DVQHHPDLYP LIPVQNPFIV 181 PGGRFDVYFY WDTFWIIKGL LVSRMFETTK GIINNFSNLV VTLGYIPNSG NLQLSRRSQP 241 PLFPHMIWEY TKATGNYEKQ WIDSMDMEMK FWENNRTIAI GTHKLFLYKT LTNCPRPENF 301 LGDFNIGKAA KTPSDVWRSI SSACESGWDF SSRWMHNNDT DLSSIHTDLI IPVDLNVFIA 361 NNYRYMAYYA NHFGRFDKSA SYRQKYEKLR YAIQEVLWDN NLGAWFDYDI SIQKRNLNFY 421 PSNVYPLMLE GMDKFADRVE DYMKKSGALE FVGGIPSSLP AQSTQQWDFP NVWAPNQHFV 481 IQSFMACNNS FLQQEAKKQA MEFIETVYNG MYNPIAGLDG GVWEKYDARS TNGAPGAGGE 541 YVVQEGFGWT NGAVMDLIWT LRDSHKKQIR SENLKLDQGQ HFALVLTAFI FCIAIAFIVI 601 IKGIIKGNTL NQRDDEEAGA RLLAEENDED DQEEL //