LOCUS       CAA94105.1               685 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans WASH complex subunit FAM21 protein.
ACCESSION   BX284606-3540
PROTEIN_ID  CAA94105.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="C05G5.2"
                     /locus_tag="CELE_C05G5.2"
                     /standard_name="C05G5.2a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00007348"
                     /db_xref="EnsemblGenomes-Tr:C05G5.2"
                     /db_xref="UniProtKB/TrEMBL:Q17676"
                     /db_xref="WormBase:WBGene00007348"
     intron_pos      22:0 (1/9)
     intron_pos      77:0 (2/9)
     intron_pos      122:0 (3/9)
     intron_pos      204:1 (4/9)
     intron_pos      365:0 (5/9)
     intron_pos      449:0 (6/9)
     intron_pos      528:0 (7/9)
     intron_pos      590:0 (8/9)
     intron_pos      665:0 (9/9)
BEGIN
        1 MQHNECLNTN INPNSLKVDK ELTQMARDIS TRMNQRMTQV ERKANDLEKF SRLVALRVNS
       61 AASRMANLKN HKAVRQVIST QNIPNSEDMR VDSRKSSGFT QEFLDSYKNA IINAGNTMNF
      121 LENPTVFTSG YIGEQSETNG NANGQSASRP QANRNRQRAS SSDEDEVVES SRSRVEIGNG
      181 VEQPKIDIGP RVAQTVEEPV TLAAPPQPKP PKPSPSTTAI LVDQVGQNGI QHSPQDVPKE
      241 VASITSQNEN SLAEHHNEKL VSESAMPIEK GPTRPAAMAS VIGEMKKKVA AKAKLLDSDS
      301 DTDREPLGSS ETESVTVKKL ETSTVEVVKT SISADPVIVI GHPKIEVIAA VATVAKTEKP
      361 AASKVLPKAV ATPVKPAEAT PAKPDESALS RKILANELKP VDTKKLVSSL FDSDSDSDTD
      421 IFKPTTSIKK QPTEVVKKSV PPKPVEVKKV ETPKPSQPPQ VKPTNHTAVP ATKPVAKKSL
      481 FSSDSDSDDD FLKSFSKSKP VAKTESIPVV KKPIEPVVVP KAVDIPAPKP TPVTNTTAVI
      541 PKVEFKKPAA KSLFDDSDSD SDLFSLPTKP KTPIAPKNRN SSIVTQPEME PSSSEPAKPA
      601 KPSITKKEPP SETMSAKISL IGDLQKSFRL PGSTPNIPVK NLPVSDENDV AAENPEDHVG
      661 SILKSRCRGP SNRRPPTRPN ASSSN
//