LOCUS       CAA93494.2               733 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans PCI domain-containing protein protein.
ACCESSION   BX284606-3351
PROTEIN_ID  CAA93494.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="pqn-39"
                     /locus_tag="CELE_F48F7.4"
                     /standard_name="F48F7.4"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00004126"
                     /db_xref="EnsemblGenomes-Tr:F48F7.4"
                     /db_xref="UniProtKB/TrEMBL:Q20576"
                     /db_xref="WormBase:WBGene00004126"
     intron_pos      67:0 (1/7)
     intron_pos      123:0 (2/7)
     intron_pos      150:0 (3/7)
     intron_pos      225:0 (4/7)
     intron_pos      295:2 (5/7)
     intron_pos      439:0 (6/7)
     intron_pos      712:2 (7/7)
BEGIN
        1 MSAKQDLAPA PATVSHADTG LQPLPPQHQT HPPNYHQGPI IYQQSYAPVA HYQQGPQVWN
       61 QPPQSTVHYV QYAPPIDASS YQENKVQSYN HYGTVHYAQP MDNGDMLMRP QQATYVPQQY
      121 VTTPQWYPAG QQTQTQFIPS YATTFNVAND PTYHPNHPMN RGGAGRRDDY HVANQSSSVG
      181 YMQFVPFVAP IGVMETQAHA SASYTANWVS STSSIPPEMK DEPESDNISQ YDGQRPTSQL
      241 NGENWTDAED HLSPTTVQNH PFNVVEPRPQ QNFVEKEKSG SQSTTRMSKN SKGDRNEGKR
      301 ELTFDERLHK ARMQKSRVEN EGVNGATSPT ATTVAAPSSN VANSSTSALT PRSNGQKKET
      361 SGSVRNEGSN NNSQNRNTKY RGAVGNNQHM YNGNEGHSGA HEQPQQQQQQ RYVNYGNATG
      421 ERERQPRRDN NYSKNRYENN YHNNSSNNQR SPYQAQNQQN QPTQQNQHPP REGAPENYRQ
      481 QSYRGNRGGR GAYRGGGYHQ PHQQNLQNPL PQQQPLNQYP PAPQIMGPQM VATMNAFQNA
      541 NIGTLPPGVQ RIPLLPGPFG MPRQVHQDIK FQNTWLDATS CPLPLAAVMS IDTRFGRGGM
      601 RGRGRGVNYT YRGAYRGGYT GGYAAPPRYI GRPVETPATP KESEQSSSTE VDDMAKKDDE
      661 ESVQDTASAT ESTVETPADQ GKTQEQNKDS DSQNGKQEPV AEKANEEIIE ILPANTKVQS
      721 PDAAAEKEKV EST
//