LOCUS       CAA93475.1              1087 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Bromo domain-containing protein protein.
ACCESSION   BX284606-2502
PROTEIN_ID  CAA93475.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="bet-2"
                     /locus_tag="CELE_F57C7.1"
                     /standard_name="F57C7.1b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00010199"
                     /db_xref="EnsemblGenomes-Tr:F57C7.1b.1"
                     /db_xref="EnsemblGenomes-Tr:F57C7.1b.2"
                     /db_xref="InterPro:IPR001487"
                     /db_xref="InterPro:IPR018359"
                     /db_xref="InterPro:IPR036427"
                     /db_xref="UniProtKB/TrEMBL:Q20948"
                     /db_xref="WormBase:WBGene00010199"
     intron_pos      263:0 (1/6)
     intron_pos      352:0 (2/6)
     intron_pos      392:0 (3/6)
     intron_pos      628:0 (4/6)
     intron_pos      795:2 (5/6)
     intron_pos      957:1 (6/6)
BEGIN
        1 MSDYSAKPSG SLARIGDYDL SSDDSDQNDE DETLIASKTI QTGAVQVNDI AVAEASPAET
       61 DAKSSASPVS GPEPPTSAVV ENRDLDEFKK ESGSNDDKQE EINEDKDSNE ETVFQQTESG
      121 SADVVDKTDV KQKDSDSSAD DDHSHSKSGS VHSPQKPQGS TTPCSVQSPA SPVGDEQAVK
      181 MEEVEEPIVA SEEVPDKKPE SVKESTDSES SGSEHGFEKM DTAEKVEDEC NDDEVAASNG
      241 TEEPEPGDKA ADTVNPWETP RQEPVDGVVQ PRTEPPAGKP TRHTNCLDFV LFTVVKDALK
      301 HKHSWPFQLP VDAIKLEIPE YHNIVNTPMD LRTIEKRLRN LYYWCAEDAI KDLNTLFDNC
      361 KKFNDRNDDI YIMCENIEGV VQRGLEWMPS EEKPADLADH HRRGMFSAST PSGKTKGPKQ
      421 RGRKSTRGRK KTSLPRGAST FKDESVDDNN DDESSKVDSI NFDDDDDTAT EKDAESRAES
      481 VQPEVVNEEP KPSTSQPPSK KRKAENGEPA VAVKIATPAT PVAAHPQEET PRRKNPNTLI
      541 EWKHLVPRWQ GKIPEWQKFC SKLLNEIHSV KNKGFAQVFY LPVDPIKLKI YDYLEVITNP
      601 MDLQTIKKKL DFKQYAEPEE FVHDINLMVD NCCKYNPKGS PAHSNALELR SFFEQRWKLF
      661 PRPGVDPIIA DSYINQNLVV NTDLIEDERI NSYLSAVKAE EKKCAEKLEQ LRSMSEGLYT
      721 IAMQRREAKL AGNTAPALAQ NQLSQLEGLG ISIKSTPMMI PELISPALSV RSSSRAPVPK
      781 IIDDIGPSPI KARKISKPRA SMASNVSVPY TPTGNPRGRK PKKSGRPKKN IYSPATVSER
      841 ISQQPPFEVT PYVSIYGRKV VGTNDKIELS ERMASIPQMY ITPILRIIQI GHHNTGKTIT
      901 SLRSLCEEEI DFNDVSDDLV IELLDYLEMI QKDKAKAEQV RQELEVKAKF YGFEAYDNKL
      961 GTIPKTRNMP PPLQHRMRSD SPSPSASRTG NQSSDSDSAS DDSSDDEPSR SNSNVAGPRR
     1021 ALELSGNSSS ASTPAGPSKA QPAVVRPSSK SVASKPAYTK RTLSESSSSS DSNGSSSDSS
     1081 DSDSEPS
//