LOCUS       CAA92129.3               602 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Choline/carnitine acyltransferase
            domain-containing protein protein.
ACCESSION   BX284606-2430
PROTEIN_ID  CAA92129.3
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="F41E7.6"
                     /locus_tag="CELE_F41E7.6"
                     /standard_name="F41E7.6"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00009622"
                     /db_xref="EnsemblGenomes-Tr:F41E7.6"
                     /db_xref="GOA:Q20278"
                     /db_xref="InterPro:IPR000542"
                     /db_xref="InterPro:IPR039551"
                     /db_xref="InterPro:IPR042231"
                     /db_xref="InterPro:IPR042232"
                     /db_xref="UniProtKB/TrEMBL:Q20278"
                     /db_xref="WormBase:WBGene00009622"
     intron_pos      31:1 (1/14)
     intron_pos      74:0 (2/14)
     intron_pos      128:2 (3/14)
     intron_pos      170:1 (4/14)
     intron_pos      238:0 (5/14)
     intron_pos      276:0 (6/14)
     intron_pos      310:0 (7/14)
     intron_pos      339:0 (8/14)
     intron_pos      378:0 (9/14)
     intron_pos      421:2 (10/14)
     intron_pos      462:0 (11/14)
     intron_pos      497:2 (12/14)
     intron_pos      534:2 (13/14)
     intron_pos      565:2 (14/14)
BEGIN
        1 MTSSTFSEQN SLPSLPLPEL EETIGKYLKS LVPIVPKDEL ETITTLANDF ASSQNGQILQ
       61 RFLKEKTISS KNWLEDWWYD AYLTNRDSLL TQNMGAVVPK FSVNDSSQIE SASHIIHHLM
      121 SYWSLIRQEK IEVTKSRGNS WDMNQDYNLF NACRVPALPK DRIKRYFRTE AEGKCPSHVI
      181 ILCNGHVWKL ETTCENSKFL NIFEIQNALK RIKESSRTSV ECSIVQLTSL GRDNWAQIRE
      241 SMIQNSNRNV ELFHDVDSAV FCLTLSDDFV ENESELMKYS IFGSPLNAYC DKNLNIIVLR
      301 DGKTCLQAEH GNVDAISLFA PCDFAADQFQ LNRKLSKKSS QNKSSSMQPV MPVKIEFLLT
      361 GSVSQKISEA ERDFYFLSSK TNVNVYHYTN FGATYCKQRT LYADTIIQIA LQMAYLKTHN
      421 KLAPTYETAS TRMFYHGRTE TVRSLTTDME KYLTACENSA TNETLKLLFF DAYNSHNTLM
      481 DAAREGKGID RHFYGLRKAQ TAIQSYGKSV EIPFLDHKSF SASGGNGNFL LSTSFLGYHE
      541 NGCFGYVVPM CKDGYGTFYR INKTSFTFTI SNWLDDATNG DEFRENLEYS LNFIKNVILT
      601 NE
//