LOCUS CAA92124.1 516 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Cation/H+ exchanger domain-containing protein protein. ACCESSION BX284606-2425 PROTEIN_ID CAA92124.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="slc-9B.1" /locus_tag="CELE_F41E7.1" /standard_name="F41E7.1" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00009617" /db_xref="EnsemblGenomes-Tr:F41E7.1" /db_xref="GOA:Q20273" /db_xref="InterPro:IPR006153" /db_xref="InterPro:IPR038770" /db_xref="UniProtKB/TrEMBL:Q20273" /db_xref="WormBase:WBGene00009617" intron_pos 20:0 (1/9) intron_pos 46:1 (2/9) intron_pos 95:1 (3/9) intron_pos 149:0 (4/9) intron_pos 185:2 (5/9) intron_pos 244:1 (6/9) intron_pos 365:0 (7/9) intron_pos 417:0 (8/9) intron_pos 474:0 (9/9) BEGIN 1 MHCVARLHNT LHNFFNNREI NSITTTILIF ISLYISIITL LGENFLNPLA DHVNPVNATN 61 EDVTVRSIFV IFILLVAGIF AAKISKALRL PPLFGCLALG IIIKNITVFD QFFVFPPFVE 121 TMIRKVALVM IIVRWGLATD IHFLYENALM PVTIGLVTAI GEIIAVTIAS YFILNISFVM 181 SIFCALILVT VSPAVTVPAM INFKEKQLGS LKRIPENILA ICCVDNLFCV ILFMVLSSII 241 FTDAPIATTI LLNAGSIVFG CIGGIVLGWI LWRFPRSDAP HTQFARITLL GTICIAVVIG 301 TYLIKYSCSG FLAALITSAM SAMQWKADNK EKLECVESTY KYIWDSFALP LLFICLGMKF 361 DCSTLTWEIV FLCIAVIAIG LLVRTILVML VTLSSHINFK EQIVVALSLL PRATFQADLA 421 PTLLLMATPF PDMAKDAALI LKAAILSVLI TAPIFDILLN LVGSKCLSQY NPQDAPAIEK 481 NFDKTYMNGD HVDETIYAAR PKTYSEYRSE AVIERY //