LOCUS       CAA92026.2               588 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans ADP-ribosylation factor-binding
            protein GGA1 protein.
ACCESSION   BX284606-2634
PROTEIN_ID  CAA92026.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="apt-9"
                     /locus_tag="CELE_W04G3.4"
                     /standard_name="W04G3.4"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00000166"
                     /db_xref="EnsemblGenomes-Tr:W04G3.4"
                     /db_xref="GOA:Q23165"
                     /db_xref="InterPro:IPR002014"
                     /db_xref="InterPro:IPR004152"
                     /db_xref="InterPro:IPR008942"
                     /db_xref="InterPro:IPR041198"
                     /db_xref="UniProtKB/TrEMBL:Q23165"
                     /db_xref="WormBase:WBGene00000166"
     intron_pos      14:1 (1/12)
     intron_pos      41:0 (2/12)
     intron_pos      69:0 (3/12)
     intron_pos      161:1 (4/12)
     intron_pos      204:0 (5/12)
     intron_pos      255:0 (6/12)
     intron_pos      316:1 (7/12)
     intron_pos      346:0 (8/12)
     intron_pos      364:0 (9/12)
     intron_pos      403:2 (10/12)
     intron_pos      458:1 (11/12)
     intron_pos      515:0 (12/12)
BEGIN
        1 MEEEPVRPID YWVCRATDRF IGDEERIKAL DFIIESIYKQ PASALLAVDL FSHKLSSPSQ
       61 EEAMLTIRAL DYLVRNGGEK VHERCGRYKF LNELVRLIAP KYNGKLTSDA LKTEIIKLLF
      121 IWQLSIKHIP KYKQVYESLK LSKIITDDPH VRETEVPVFA VPPVRSSVFD NEEQAVLLKA
      181 LLSSNRPEDL ETANNLIKTL VETEEHKLVK IHERRKKLDH AINLCNQVEH LRLDKAAETI
      241 GLGNYSPDNE LTLQRVTNEL IQLQELFYGY VNELAENNDP CLEEVLNIND QINRVLPENE
      301 TPKCGNRAPI SARTQLDPEN QELLVFNTPT SEVPPKNGFC DPRDLEGSLL NNMIESEFVE
      361 EPKIVPVQQM TPVLNRNSSA SPRASGDSSI FETDFLAGKR LPEPLKPPTL NELKPNTTTI
      421 TLEALEVLVP PMSPEPTSLS PKAIPEKVAL NPSSIIMRNR VPIEVLYSKG MRILLYYCQS
      481 DMTVSNIHSY VLVIQNHNNF TIKDVNLSLK TNDKNVIIRL QDSVNNLAGF NIFGQQETIN
      541 LLLCIQQLND VKDVELDFTL AYKKSLESAI SGSFTLPIIP EHIFNINF
//